RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 PNNQ9H307 717 aaKnown RBP14.75□□□□□ -0.05
CCND1-201ENST00000227507 PDE3BQ13370 1112 aa14.74□□□□□ -0.05
CCND1-201ENST00000227507 HSP90AA2PQ14568 343 aaPredicted RBP14.74□□□□□ -0.05
CCND1-201ENST00000227507 RNF123Q5XPI4 1314 aa14.74□□□□□ -0.05
CCND1-201ENST00000227507 CHD1O14646 1710 aa14.73□□□□□ -0.05
CCND1-201ENST00000227507 MORC1Q86VD1 984 aa14.73□□□□□ -0.05
CCND1-201ENST00000227507 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
CCND1-201ENST00000227507 KTN1Q86UP2 1357 aaKnown RBP14.72□□□□□ -0.05
CCND1-201ENST00000227507 SOX12O15370 315 aa14.71□□□□□ -0.05
CCND1-201ENST00000227507 ITSN2Q9NZM3 1697 aa14.71□□□□□ -0.05
CCND1-201ENST00000227507 A0A0G2JS52 829 aa14.71□□□□□ -0.06
CCND1-201ENST00000227507 CENPQQ7L2Z9 268 aaPredicted RBP14.71□□□□□ -0.06
CCND1-201ENST00000227507 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.06
CCND1-201ENST00000227507 FAM43AQ8N2R8 423 aa14.71□□□□□ -0.06
CCND1-201ENST00000227507 FGD1P98174 961 aa14.7□□□□□ -0.06
CCND1-201ENST00000227507 NEUROD2Q15784 382 aa14.7□□□□□ -0.06
CCND1-201ENST00000227507 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
CCND1-201ENST00000227507 NGDNQ8NEJ9 315 aaKnown RBP14.7□□□□□ -0.06
CCND1-201ENST00000227507 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
CCND1-201ENST00000227507 HSP90AA1P07900 732 aaKnown RBP14.69□□□□□ -0.06
CCND1-201ENST00000227507 DHX29Q7Z478 1369 aaKnown RBP14.69□□□□□ -0.06
CCND1-201ENST00000227507 L1TD1Q5T7N2 865 aaKnown RBP14.69□□□□□ -0.06
CCND1-201ENST00000227507 CCDC146Q8IYE0 955 aa14.68□□□□□ -0.06
CCND1-201ENST00000227507 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
CCND1-201ENST00000227507 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
CCND1-201ENST00000227507 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
CCND1-201ENST00000227507 ZNF518AQ6AHZ1 1483 aa14.67□□□□□ -0.06
CCND1-201ENST00000227507 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
CCND1-201ENST00000227507 MINK1Q8N4C8 1332 aaPredicted RBP14.67□□□□□ -0.06
CCND1-201ENST00000227507 SYCP2Q9BX26 1530 aa14.66□□□□□ -0.06
CCND1-201ENST00000227507 CFAP43Q8NDM7 1665 aa14.66□□□□□ -0.06
CCND1-201ENST00000227507 GOLGA6L3A6NEY3 463 aa14.65□□□□□ -0.06
CCND1-201ENST00000227507 TRIM44Q96DX7 344 aaPredicted RBP14.65□□□□□ -0.06
CCND1-201ENST00000227507 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
CCND1-201ENST00000227507 BRD4O60885 1362 aaPredicted RBP14.65□□□□□ -0.06
CCND1-201ENST00000227507 PANK3Q9H999 370 aa14.65□□□□□ -0.06
CCND1-201ENST00000227507 ANKRD30BQ9BXX2 1392 aa14.65□□□□□ -0.06
CCND1-201ENST00000227507 CENPJQ9HC77 1338 aaPredicted RBP14.64□□□□□ -0.07
CCND1-201ENST00000227507 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
CCND1-201ENST00000227507 ADAMTS8Q9UP79 889 aa14.64□□□□□ -0.07
CCND1-201ENST00000227507 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
CCND1-201ENST00000227507 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
CCND1-201ENST00000227507 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
CCND1-201ENST00000227507 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
CCND1-201ENST00000227507 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
CCND1-201ENST00000227507 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
CCND1-201ENST00000227507 ARID3AQ99856 593 aa14.61□□□□□ -0.07
CCND1-201ENST00000227507 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
CCND1-201ENST00000227507 RRAGDQ9NQL2 400 aaPredicted RBP14.6□□□□□ -0.07
CCND1-201ENST00000227507 A2MP01023 1474 aa14.6□□□□□ -0.07
CCND1-201ENST00000227507 ANKLE2Q86XL3 938 aa14.6□□□□□ -0.07
CCND1-201ENST00000227507 ERBINQ96RT1 1412 aa14.6□□□□□ -0.07
CCND1-201ENST00000227507 ABCA8O94911 1581 aa14.6□□□□□ -0.07
CCND1-201ENST00000227507 COG6Q9Y2V7 657 aa14.6□□□□□ -0.07
CCND1-201ENST00000227507 C8orf34Q49A92 452 aa14.59□□□□□ -0.07
CCND1-201ENST00000227507 TCOF1Q13428 1488 aaKnown RBP14.58□□□□□ -0.07
CCND1-201ENST00000227507 CLUAP1Q96AJ1 413 aa14.58□□□□□ -0.07
CCND1-201ENST00000227507 KDM5BQ9UGL1 1544 aa14.58□□□□□ -0.08
CCND1-201ENST00000227507 AAMPQ13685 434 aa14.58□□□□□ -0.08
CCND1-201ENST00000227507 BCAR3O75815 825 aa14.58□□□□□ -0.08
CCND1-201ENST00000227507 DUOX2Q9NRD8 1548 aa14.57□□□□□ -0.08
CCND1-201ENST00000227507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCND1-201ENST00000227507 FBXO31Q5XUX0 539 aaPredicted RBP14.57□□□□□ -0.08
CCND1-201ENST00000227507 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
CCND1-201ENST00000227507 NBPF1Q3BBV0 1214 aa14.57□□□□□ -0.08
CCND1-201ENST00000227507 MYH16Q9H6N6 1097 aa14.56□□□□□ -0.08
CCND1-201ENST00000227507 BCL2L13Q9BXK5 485 aa14.56□□□□□ -0.08
CCND1-201ENST00000227507 PANK2Q9BZ23 570 aa14.56□□□□□ -0.08
CCND1-201ENST00000227507 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
CCND1-201ENST00000227507 APAF1O14727 1248 aa14.55□□□□□ -0.08
CCND1-201ENST00000227507 MFAP1P55081 439 aaKnown RBP14.55□□□□□ -0.08
CCND1-201ENST00000227507 PANK1Q8TE04 598 aa14.55□□□□□ -0.08
CCND1-201ENST00000227507 IDI1Q13907 227 aa14.55□□□□□ -0.08
CCND1-201ENST00000227507 SLC26A8Q96RN1 970 aa14.54□□□□□ -0.08
CCND1-201ENST00000227507 RTEL1-TNFRSF6BF6WH68 1400 aa14.54□□□□□ -0.08
CCND1-201ENST00000227507 ATF3P18847 181 aa14.54□□□□□ -0.08
CCND1-201ENST00000227507 SEC24BO95487 1268 aa14.53□□□□□ -0.08
CCND1-201ENST00000227507 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
CCND1-201ENST00000227507 ANP32BQ92688 251 aaKnown RBP14.53□□□□□ -0.08
CCND1-201ENST00000227507 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
CCND1-201ENST00000227507 ERCC6L2Q5T890 1561 aa14.53□□□□□ -0.08
CCND1-201ENST00000227507 SHANK2Q9UPX8 1470 aa14.53□□□□□ -0.08
CCND1-201ENST00000227507 CGNL1Q0VF96 1302 aa14.52□□□□□ -0.08
CCND1-201ENST00000227507 U2AF1L5P0DN76 240 aaPredicted RBP14.52□□□□□ -0.08
CCND1-201ENST00000227507 U2AF1Q01081 240 aaKnown RBP eCLIP14.52□□□□□ -0.08
CCND1-201ENST00000227507 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.08
CCND1-201ENST00000227507 SPATA31E1Q6ZUB1 1445 aa14.52□□□□□ -0.09
CCND1-201ENST00000227507 NEO1Q92859 1461 aa14.51□□□□□ -0.09
CCND1-201ENST00000227507 PAXIP1Q6ZW49 1069 aaPredicted RBP14.51□□□□□ -0.09
CCND1-201ENST00000227507 NCLP19338 710 aaKnown RBP14.5□□□□□ -0.09
CCND1-201ENST00000227507 AMPHP49418 695 aa14.5□□□□□ -0.09
CCND1-201ENST00000227507 PRAM1Q96QH2 718 aa14.5□□□□□ -0.09
CCND1-201ENST00000227507 RRP9O43818 475 aaKnown RBP14.5□□□□□ -0.09
CCND1-201ENST00000227507 COG3Q96JB2 828 aa14.5□□□□□ -0.09
CCND1-201ENST00000227507 TAF7LQ5H9L4 462 aa14.5□□□□□ -0.09
CCND1-201ENST00000227507 RRP7AQ9Y3A4 280 aaKnown RBP14.5□□□□□ -0.09
CCND1-201ENST00000227507 XRCC6P12956 609 aaKnown RBP eCLIP14.5□□□□□ -0.09
CCND1-201ENST00000227507 IGHDP01880 384 aa14.49□□□□□ -0.09
CCND1-201ENST00000227507 MAGI3Q5TCQ9 1506 aa14.49□□□□□ -0.09
CCND1-201ENST00000227507 PSME1Q06323 249 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms