RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 MYOM1P52179 1685 aa20.18■□□□□ 0.82
VTN-201ENST00000226218 MADDQ8WXG6 1647 aa20.18■□□□□ 0.82
VTN-201ENST00000226218 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
VTN-201ENST00000226218 EIF3AQ14152 1382 aaKnown RBP20.16■□□□□ 0.82
VTN-201ENST00000226218 ABCC2Q92887 1545 aa20.16■□□□□ 0.82
VTN-201ENST00000226218 GOLGA2Q08379 1002 aa20.15■□□□□ 0.82
VTN-201ENST00000226218 SLFN5Q08AF3 891 aa20.15■□□□□ 0.82
VTN-201ENST00000226218 AMER1Q5JTC6 1135 aaPredicted RBP20.15■□□□□ 0.82
VTN-201ENST00000226218 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.14■□□□□ 0.81
VTN-201ENST00000226218 ASXL1Q8IXJ9 1541 aa20.14■□□□□ 0.81
VTN-201ENST00000226218 DAXXQ9UER7 740 aaPredicted RBP20.12■□□□□ 0.81
VTN-201ENST00000226218 SPHKAPQ2M3C7 1700 aa20.12■□□□□ 0.81
VTN-201ENST00000226218 TTC37Q6PGP7 1564 aa20.12■□□□□ 0.81
VTN-201ENST00000226218 WDR43Q15061 677 aaKnown RBP eCLIP20.11■□□□□ 0.81
VTN-201ENST00000226218 NPC1L1Q9UHC9 1359 aa20.11■□□□□ 0.81
VTN-201ENST00000226218 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
VTN-201ENST00000226218 NKTRP30414 1462 aaKnown RBP20.1■□□□□ 0.81
VTN-201ENST00000226218 DUOX2Q9NRD8 1548 aa20.1■□□□□ 0.81
VTN-201ENST00000226218 USP19O94966 1318 aa20.1■□□□□ 0.81
VTN-201ENST00000226218 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.09■□□□□ 0.81
VTN-201ENST00000226218 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.81
VTN-201ENST00000226218 CEP152O94986 1710 aa20.07■□□□□ 0.8
VTN-201ENST00000226218 RGS3P49796 1198 aa20.06■□□□□ 0.8
VTN-201ENST00000226218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.06■□□□□ 0.8
VTN-201ENST00000226218 SPINK5Q9NQ38 1064 aaPredicted RBP20.06■□□□□ 0.8
VTN-201ENST00000226218 ARHGAP5Q13017 1502 aa20.06■□□□□ 0.8
VTN-201ENST00000226218 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
VTN-201ENST00000226218 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
VTN-201ENST00000226218 NLRP1Q9C000 1473 aa20.05■□□□□ 0.8
VTN-201ENST00000226218 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
VTN-201ENST00000226218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.03■□□□□ 0.8
VTN-201ENST00000226218 KDM5AP29375 1690 aaKnown RBP20.03■□□□□ 0.8
VTN-201ENST00000226218 KIAA1210Q9ULL0 1709 aa20.02■□□□□ 0.8
VTN-201ENST00000226218 TRPM2O94759 1503 aa20.01■□□□□ 0.79
VTN-201ENST00000226218 IGHDP01880 384 aa20.01■□□□□ 0.79
VTN-201ENST00000226218 FBLN2P98095 1184 aa20■□□□□ 0.79
VTN-201ENST00000226218 BCAR3O75815 825 aa20■□□□□ 0.79
VTN-201ENST00000226218 CDCA8Q53HL2 280 aa20■□□□□ 0.79
VTN-201ENST00000226218 FAM43AQ8N2R8 423 aa20■□□□□ 0.79
VTN-201ENST00000226218 NINLQ9Y2I6 1382 aa20■□□□□ 0.79
VTN-201ENST00000226218 E9PSI1 815 aa19.99■□□□□ 0.79
VTN-201ENST00000226218 CGNL1Q0VF96 1302 aa19.98■□□□□ 0.79
VTN-201ENST00000226218 CCDC146Q8IYE0 955 aa19.97■□□□□ 0.79
VTN-201ENST00000226218 APAF1O14727 1248 aa19.97■□□□□ 0.79
VTN-201ENST00000226218 PDE3AQ14432 1141 aa19.97■□□□□ 0.79
VTN-201ENST00000226218 CLTCL1P53675 1640 aa19.97■□□□□ 0.79
VTN-201ENST00000226218 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
VTN-201ENST00000226218 MAPK8IP3Q9UPT6 1336 aa19.96■□□□□ 0.79
VTN-201ENST00000226218 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
VTN-201ENST00000226218 SEC24BO95487 1268 aa19.94■□□□□ 0.78
VTN-201ENST00000226218 PTPRTO14522 1441 aa19.94■□□□□ 0.78
VTN-201ENST00000226218 ZMYM3Q14202 1370 aa19.93■□□□□ 0.78
VTN-201ENST00000226218 SHPRHQ149N8 1683 aa19.93■□□□□ 0.78
VTN-201ENST00000226218 NEURL4Q96JN8 1562 aa19.93■□□□□ 0.78
VTN-201ENST00000226218 CLUAP1Q96AJ1 413 aa19.93■□□□□ 0.78
VTN-201ENST00000226218 STAC3Q96MF2 364 aa19.93■□□□□ 0.78
VTN-201ENST00000226218 DEPDC5O75140 1603 aa19.92■□□□□ 0.78
VTN-201ENST00000226218 ANTXR1Q9H6X2 564 aa19.91■□□□□ 0.78
VTN-201ENST00000226218 POGKQ9P215 609 aa19.91■□□□□ 0.78
VTN-201ENST00000226218 ERVK-7P63135 1459 aa19.91■□□□□ 0.78
VTN-201ENST00000226218 ABCC1P33527 1531 aa19.9■□□□□ 0.78
VTN-201ENST00000226218 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
VTN-201ENST00000226218 UBE2Q2Q8WVN8 375 aa19.89■□□□□ 0.77
VTN-201ENST00000226218 BECN1Q14457 450 aa19.88■□□□□ 0.77
VTN-201ENST00000226218 TET3O43151 1660 aa19.88■□□□□ 0.77
VTN-201ENST00000226218 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
VTN-201ENST00000226218 CENPJQ9HC77 1338 aaPredicted RBP19.88■□□□□ 0.77
VTN-201ENST00000226218 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
VTN-201ENST00000226218 MYO3AQ8NEV4 1616 aa19.88■□□□□ 0.77
VTN-201ENST00000226218 ABCA6Q8N139 1617 aa19.86■□□□□ 0.77
VTN-201ENST00000226218 PANK1Q8TE04 598 aa19.86■□□□□ 0.77
VTN-201ENST00000226218 IQSEC2Q5JU85 1478 aa19.86■□□□□ 0.77
VTN-201ENST00000226218 MAP3K4Q9Y6R4 1608 aa19.86■□□□□ 0.77
VTN-201ENST00000226218 COG6Q9Y2V7 657 aa19.85■□□□□ 0.77
VTN-201ENST00000226218 WWC1Q8IX03 1113 aa19.85■□□□□ 0.77
VTN-201ENST00000226218 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
VTN-201ENST00000226218 AAMPQ13685 434 aa19.84■□□□□ 0.77
VTN-201ENST00000226218 PLCH2O75038 1416 aa19.84■□□□□ 0.77
VTN-201ENST00000226218 TBC1D32Q96NH3 1257 aa19.84■□□□□ 0.77
VTN-201ENST00000226218 CARD14Q9BXL6 1004 aa19.84■□□□□ 0.77
VTN-201ENST00000226218 VWDEQ8N2E2 1590 aa19.83■□□□□ 0.77
VTN-201ENST00000226218 MYOM2P54296 1465 aa19.83■□□□□ 0.76
VTN-201ENST00000226218 TRAPPC8Q9Y2L5 1435 aa19.82■□□□□ 0.76
VTN-201ENST00000226218 PMFBP1Q8TBY8 1022 aa19.81■□□□□ 0.76
VTN-201ENST00000226218 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
VTN-201ENST00000226218 SLKQ9H2G2 1235 aaPredicted RBP19.81■□□□□ 0.76
VTN-201ENST00000226218 ZFYVE16Q7Z3T8 1539 aa19.81■□□□□ 0.76
VTN-201ENST00000226218 L1TD1Q5T7N2 865 aaKnown RBP19.81■□□□□ 0.76
VTN-201ENST00000226218 RARSP54136 660 aaKnown RBP19.79■□□□□ 0.76
VTN-201ENST00000226218 RRAGDQ9NQL2 400 aaPredicted RBP19.79■□□□□ 0.76
VTN-201ENST00000226218 PCDHB15Q9Y5E8 787 aa19.79■□□□□ 0.76
VTN-201ENST00000226218 RTEL1-TNFRSF6BF6WH68 1400 aa19.79■□□□□ 0.76
VTN-201ENST00000226218 SLC24A1O60721 1099 aa19.79■□□□□ 0.76
VTN-201ENST00000226218 TBC1D2Q9BYX2 928 aa19.79■□□□□ 0.76
VTN-201ENST00000226218 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
VTN-201ENST00000226218 ZC3H13Q5T200 1668 aaKnown RBP19.78■□□□□ 0.76
VTN-201ENST00000226218 CANXP27824 592 aaKnown RBP19.77■□□□□ 0.76
VTN-201ENST00000226218 RLBP1P12271 317 aa19.76■□□□□ 0.75
VTN-201ENST00000226218 PDZRN3Q9UPQ7 1066 aa19.76■□□□□ 0.75
VTN-201ENST00000226218 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms