RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 KANK1Q14678 1352 aa14.41□□□□□ -0.1
NEFM-201ENST00000221166 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
NEFM-201ENST00000221166 SAFB2Q14151 953 aaKnown RBP eCLIP14.41□□□□□ -0.1
NEFM-201ENST00000221166 SLKQ9H2G2 1235 aaPredicted RBP14.41□□□□□ -0.1
NEFM-201ENST00000221166 GSE1Q14687 1217 aa14.41□□□□□ -0.1
NEFM-201ENST00000221166 KDM5DQ9BY66 1539 aa14.4□□□□□ -0.1
NEFM-201ENST00000221166 ABCA8O94911 1581 aa14.4□□□□□ -0.1
NEFM-201ENST00000221166 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
NEFM-201ENST00000221166 EIF3AQ14152 1382 aaKnown RBP14.4□□□□□ -0.1
NEFM-201ENST00000221166 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
NEFM-201ENST00000221166 UPF2Q9HAU5 1272 aaKnown RBP14.39□□□□□ -0.11
NEFM-201ENST00000221166 BRPF3Q9ULD4 1205 aa14.39□□□□□ -0.11
NEFM-201ENST00000221166 GGT6Q6P531 493 aa14.39□□□□□ -0.11
NEFM-201ENST00000221166 BLMP54132 1417 aaPredicted RBP14.39□□□□□ -0.11
NEFM-201ENST00000221166 FRAT2O75474 233 aaPredicted RBP14.38□□□□□ -0.11
NEFM-201ENST00000221166 ADCY10Q96PN6 1610 aa14.38□□□□□ -0.11
NEFM-201ENST00000221166 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
NEFM-201ENST00000221166 SAMD9LQ8IVG5 1584 aa14.38□□□□□ -0.11
NEFM-201ENST00000221166 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
NEFM-201ENST00000221166 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
NEFM-201ENST00000221166 IGHDP01880 384 aa14.37□□□□□ -0.11
NEFM-201ENST00000221166 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
NEFM-201ENST00000221166 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
NEFM-201ENST00000221166 KDM2BQ8NHM5 1336 aa14.36□□□□□ -0.11
NEFM-201ENST00000221166 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
NEFM-201ENST00000221166 BECN1Q14457 450 aa14.36□□□□□ -0.11
NEFM-201ENST00000221166 ADGRF5Q8IZF2 1346 aa14.36□□□□□ -0.11
NEFM-201ENST00000221166 EIF5BO60841 1220 aaKnown RBP14.36□□□□□ -0.11
NEFM-201ENST00000221166 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
NEFM-201ENST00000221166 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
NEFM-201ENST00000221166 CFAP53Q96M91 514 aa14.36□□□□□ -0.11
NEFM-201ENST00000221166 ANO8Q9HCE9 1232 aaPredicted RBP14.36□□□□□ -0.11
NEFM-201ENST00000221166 U2SURPO15042 1029 aaKnown RBP14.35□□□□□ -0.11
NEFM-201ENST00000221166 ARHGEF5Q12774 1597 aa14.34□□□□□ -0.11
NEFM-201ENST00000221166 TRAPPC8Q9Y2L5 1435 aa14.34□□□□□ -0.11
NEFM-201ENST00000221166 FTSJ3Q8IY81 847 aaKnown RBP14.34□□□□□ -0.11
NEFM-201ENST00000221166 CGNL1Q0VF96 1302 aa14.34□□□□□ -0.11
NEFM-201ENST00000221166 ZMYM4Q5VZL5 1548 aa14.34□□□□□ -0.11
NEFM-201ENST00000221166 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.11
NEFM-201ENST00000221166 WWC1Q8IX03 1113 aa14.33□□□□□ -0.12
NEFM-201ENST00000221166 TCP11L2Q8N4U5 519 aa14.33□□□□□ -0.12
NEFM-201ENST00000221166 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
NEFM-201ENST00000221166 TRPM1Q7Z4N2 1603 aa14.32□□□□□ -0.12
NEFM-201ENST00000221166 STK26Q9P289 416 aa14.32□□□□□ -0.12
NEFM-201ENST00000221166 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
NEFM-201ENST00000221166 MTHFSP49914 203 aa14.31□□□□□ -0.12
NEFM-201ENST00000221166 SCAPERQ9BY12 1400 aa14.3□□□□□ -0.12
NEFM-201ENST00000221166 STAC3Q96MF2 364 aa14.3□□□□□ -0.12
NEFM-201ENST00000221166 TNNQ9UQP3 1299 aa14.3□□□□□ -0.12
NEFM-201ENST00000221166 WDR7Q9Y4E6 1490 aa14.3□□□□□ -0.12
NEFM-201ENST00000221166 DUOX2Q9NRD8 1548 aa14.3□□□□□ -0.12
NEFM-201ENST00000221166 NKTRP30414 1462 aaKnown RBP14.3□□□□□ -0.12
NEFM-201ENST00000221166 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
NEFM-201ENST00000221166 ZNF521Q96K83 1311 aa14.29□□□□□ -0.12
NEFM-201ENST00000221166 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
NEFM-201ENST00000221166 PDE3AQ14432 1141 aa14.29□□□□□ -0.12
NEFM-201ENST00000221166 SEC24BO95487 1268 aa14.28□□□□□ -0.12
NEFM-201ENST00000221166 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
NEFM-201ENST00000221166 ASXL1Q8IXJ9 1541 aa14.28□□□□□ -0.12
NEFM-201ENST00000221166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.28□□□□□ -0.12
NEFM-201ENST00000221166 PLCH2O75038 1416 aa14.28□□□□□ -0.12
NEFM-201ENST00000221166 TTC37Q6PGP7 1564 aa14.28□□□□□ -0.12
NEFM-201ENST00000221166 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
NEFM-201ENST00000221166 RWDD1Q9H446 243 aaPredicted RBP14.27□□□□□ -0.12
NEFM-201ENST00000221166 NPM1P06748 294 aaKnown RBP eCLIP14.27□□□□□ -0.12
NEFM-201ENST00000221166 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.13
NEFM-201ENST00000221166 EIF2AK4Q9P2K8 1649 aaKnown RBP14.26□□□□□ -0.13
NEFM-201ENST00000221166 PDZRN3Q9UPQ7 1066 aa14.26□□□□□ -0.13
NEFM-201ENST00000221166 INSRP06213 1382 aa14.26□□□□□ -0.13
NEFM-201ENST00000221166 SMC4Q9NTJ3 1288 aa14.26□□□□□ -0.13
NEFM-201ENST00000221166 CDC42BPBQ9Y5S2 1711 aa14.25□□□□□ -0.13
NEFM-201ENST00000221166 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
NEFM-201ENST00000221166 ITPRIPQ8IWB1 547 aa14.25□□□□□ -0.13
NEFM-201ENST00000221166 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
NEFM-201ENST00000221166 RARSP54136 660 aaKnown RBP14.25□□□□□ -0.13
NEFM-201ENST00000221166 TSR2Q969E8 191 aaKnown RBP14.25□□□□□ -0.13
NEFM-201ENST00000221166 GZF1Q9H116 711 aaPredicted RBP14.25□□□□□ -0.13
NEFM-201ENST00000221166 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
NEFM-201ENST00000221166 PREX2Q70Z35 1606 aa14.24□□□□□ -0.13
NEFM-201ENST00000221166 NSD3Q9BZ95 1437 aa14.24□□□□□ -0.13
NEFM-201ENST00000221166 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
NEFM-201ENST00000221166 E9PCH4 1651 aa14.24□□□□□ -0.13
NEFM-201ENST00000221166 PCDHB15Q9Y5E8 787 aa14.24□□□□□ -0.13
NEFM-201ENST00000221166 RLBP1P12271 317 aa14.23□□□□□ -0.13
NEFM-201ENST00000221166 TRMT2AQ8IZ69 625 aaKnown RBP14.23□□□□□ -0.13
NEFM-201ENST00000221166 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
NEFM-201ENST00000221166 MAST1Q9Y2H9 1570 aa14.22□□□□□ -0.13
NEFM-201ENST00000221166 GGNBP2Q9H3C7 697 aa14.22□□□□□ -0.13
NEFM-201ENST00000221166 ZKSCAN2Q63HK3 967 aa14.21□□□□□ -0.13
NEFM-201ENST00000221166 POGKQ9P215 609 aa14.21□□□□□ -0.14
NEFM-201ENST00000221166 DZIP1LQ8IYY4 767 aaKnown RBP14.2□□□□□ -0.14
NEFM-201ENST00000221166 ATP10AO60312 1499 aa14.19□□□□□ -0.14
NEFM-201ENST00000221166 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
NEFM-201ENST00000221166 ERCC6L2Q5T890 1561 aa14.19□□□□□ -0.14
NEFM-201ENST00000221166 EXOSC9Q06265 439 aaKnown RBP14.19□□□□□ -0.14
NEFM-201ENST00000221166 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
NEFM-201ENST00000221166 UNC13BO14795 1591 aa14.18□□□□□ -0.14
NEFM-201ENST00000221166 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
NEFM-201ENST00000221166 NOS1P29475 1434 aa14.18□□□□□ -0.14
NEFM-201ENST00000221166 WDR63Q8IWG1 891 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms