RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
VPS18-201ENST00000220509 FANCAO15360 1455 aa13.6□□□□□ -0.23
VPS18-201ENST00000220509 FRAT1Q92837 279 aaPredicted RBP13.59□□□□□ -0.23
VPS18-201ENST00000220509 PLCH2O75038 1416 aa13.59□□□□□ -0.23
VPS18-201ENST00000220509 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
VPS18-201ENST00000220509 ADGRL1O94910 1474 aa13.58□□□□□ -0.23
VPS18-201ENST00000220509 TMEM132EQ6IEE7 984 aa13.58□□□□□ -0.24
VPS18-201ENST00000220509 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
VPS18-201ENST00000220509 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
VPS18-201ENST00000220509 CNTLNQ9NXG0 1405 aa13.57□□□□□ -0.24
VPS18-201ENST00000220509 GSE1Q14687 1217 aa13.57□□□□□ -0.24
VPS18-201ENST00000220509 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
VPS18-201ENST00000220509 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
VPS18-201ENST00000220509 SECISBP2LQ93073 1101 aaKnown RBP13.56□□□□□ -0.24
VPS18-201ENST00000220509 ITSN2Q9NZM3 1697 aa13.56□□□□□ -0.24
VPS18-201ENST00000220509 CCDC146Q8IYE0 955 aa13.56□□□□□ -0.24
VPS18-201ENST00000220509 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
VPS18-201ENST00000220509 ABCC10Q5T3U5 1492 aa13.56□□□□□ -0.24
VPS18-201ENST00000220509 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
VPS18-201ENST00000220509 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
VPS18-201ENST00000220509 GTF2E1P29083 439 aaPredicted RBP13.55□□□□□ -0.24
VPS18-201ENST00000220509 CNPY4Q8N129 248 aa13.54□□□□□ -0.24
VPS18-201ENST00000220509 DDRGK1Q96HY6 314 aa13.54□□□□□ -0.24
VPS18-201ENST00000220509 WDR7Q9Y4E6 1490 aa13.54□□□□□ -0.24
VPS18-201ENST00000220509 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
VPS18-201ENST00000220509 PZPP20742 1482 aa13.53□□□□□ -0.24
VPS18-201ENST00000220509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.53□□□□□ -0.24
VPS18-201ENST00000220509 NFKBIBQ15653 356 aa13.52□□□□□ -0.24
VPS18-201ENST00000220509 FTSJ3Q8IY81 847 aaKnown RBP13.52□□□□□ -0.24
VPS18-201ENST00000220509 HSP90B1P14625 803 aaKnown RBP13.52□□□□□ -0.25
VPS18-201ENST00000220509 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
VPS18-201ENST00000220509 WWC1Q8IX03 1113 aa13.51□□□□□ -0.25
VPS18-201ENST00000220509 SOX12O15370 315 aa13.51□□□□□ -0.25
VPS18-201ENST00000220509 UPF2Q9HAU5 1272 aaKnown RBP13.51□□□□□ -0.25
VPS18-201ENST00000220509 MBD5Q9P267 1494 aa13.5□□□□□ -0.25
VPS18-201ENST00000220509 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
VPS18-201ENST00000220509 SLKQ9H2G2 1235 aaPredicted RBP13.5□□□□□ -0.25
VPS18-201ENST00000220509 BCCIPQ9P287 314 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS18-201ENST00000220509 TTC37Q6PGP7 1564 aa13.5□□□□□ -0.25
VPS18-201ENST00000220509 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
VPS18-201ENST00000220509 ZBTB7CA1YPR0 619 aa13.49□□□□□ -0.25
VPS18-201ENST00000220509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS18-201ENST00000220509 U2AF1L5P0DN76 240 aaPredicted RBP13.49□□□□□ -0.25
VPS18-201ENST00000220509 U2AF1Q01081 240 aaKnown RBP eCLIP13.49□□□□□ -0.25
VPS18-201ENST00000220509 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
VPS18-201ENST00000220509 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
VPS18-201ENST00000220509 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
VPS18-201ENST00000220509 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
VPS18-201ENST00000220509 CFAP65Q6ZU64 1925 aaKnown RBP13.48□□□□□ -0.25
VPS18-201ENST00000220509 NCLP19338 710 aaKnown RBP13.47□□□□□ -0.25
VPS18-201ENST00000220509 FBXO31Q5XUX0 539 aaPredicted RBP13.47□□□□□ -0.25
VPS18-201ENST00000220509 GZF1Q9H116 711 aaPredicted RBP13.47□□□□□ -0.25
VPS18-201ENST00000220509 VGLL3A8MV65 326 aa13.47□□□□□ -0.25
VPS18-201ENST00000220509 FRAT2O75474 233 aaPredicted RBP13.47□□□□□ -0.25
VPS18-201ENST00000220509 FAM43AQ8N2R8 423 aa13.46□□□□□ -0.25
VPS18-201ENST00000220509 CDCA7LQ96GN5 454 aa13.45□□□□□ -0.26
VPS18-201ENST00000220509 SAMD9LQ8IVG5 1584 aa13.45□□□□□ -0.26
VPS18-201ENST00000220509 RRP7AQ9Y3A4 280 aaKnown RBP13.45□□□□□ -0.26
VPS18-201ENST00000220509 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
VPS18-201ENST00000220509 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
VPS18-201ENST00000220509 FAM135AQ9P2D6 1515 aa13.45□□□□□ -0.26
VPS18-201ENST00000220509 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
VPS18-201ENST00000220509 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
VPS18-201ENST00000220509 PATL2C9JE40 543 aaKnown RBP13.44□□□□□ -0.26
VPS18-201ENST00000220509 CRBNQ96SW2 442 aa13.44□□□□□ -0.26
VPS18-201ENST00000220509 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
VPS18-201ENST00000220509 KDM5BQ9UGL1 1544 aa13.44□□□□□ -0.26
VPS18-201ENST00000220509 DENND4BO75064 1496 aaPredicted RBP13.43□□□□□ -0.26
VPS18-201ENST00000220509 DHX29Q7Z478 1369 aaKnown RBP13.43□□□□□ -0.26
VPS18-201ENST00000220509 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
VPS18-201ENST00000220509 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
VPS18-201ENST00000220509 ZCCHC11Q5TAX3 1644 aaKnown RBP13.42□□□□□ -0.26
VPS18-201ENST00000220509 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
VPS18-201ENST00000220509 APAF1O14727 1248 aa13.41□□□□□ -0.26
VPS18-201ENST00000220509 VGFO15240 615 aaPredicted RBP13.41□□□□□ -0.26
VPS18-201ENST00000220509 TEX2Q8IWB9 1127 aa13.41□□□□□ -0.26
VPS18-201ENST00000220509 PNNQ9H307 717 aaKnown RBP13.41□□□□□ -0.26
VPS18-201ENST00000220509 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
VPS18-201ENST00000220509 IDI1Q13907 227 aa13.4□□□□□ -0.26
VPS18-201ENST00000220509 ERBINQ96RT1 1412 aa13.4□□□□□ -0.26
VPS18-201ENST00000220509 MAPK8IP2Q13387 824 aaPredicted RBP13.4□□□□□ -0.26
VPS18-201ENST00000220509 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
VPS18-201ENST00000220509 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
VPS18-201ENST00000220509 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
VPS18-201ENST00000220509 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
VPS18-201ENST00000220509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS18-201ENST00000220509 PNISRQ8TF01 805 aaKnown RBP13.39□□□□□ -0.27
VPS18-201ENST00000220509 ZHX1Q9UKY1 873 aaPredicted RBP13.39□□□□□ -0.27
VPS18-201ENST00000220509 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
VPS18-201ENST00000220509 DUOX2Q9NRD8 1548 aa13.38□□□□□ -0.27
VPS18-201ENST00000220509 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
VPS18-201ENST00000220509 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
VPS18-201ENST00000220509 BCL2L13Q9BXK5 485 aa13.37□□□□□ -0.27
VPS18-201ENST00000220509 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
VPS18-201ENST00000220509 CEBPAP49715 358 aaPredicted RBP13.37□□□□□ -0.27
VPS18-201ENST00000220509 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
VPS18-201ENST00000220509 SLC12A5Q9H2X9 1139 aa13.37□□□□□ -0.27
VPS18-201ENST00000220509 TEX14Q8IWB6 1497 aa13.36□□□□□ -0.27
VPS18-201ENST00000220509 CENPJQ9HC77 1338 aaPredicted RBP13.36□□□□□ -0.27
VPS18-201ENST00000220509 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms