RNA–Protein interactions for RNA: ENST00000218328.12

HUWE1-201, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene HUWE1, Length 5,488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-201ENST00000218328 ZKSCAN1P17029 563 aaPredicted RBP21.77■■□□□ 1.08
HUWE1-201ENST00000218328 NFKBIBQ15653 356 aa21.77■■□□□ 1.08
HUWE1-201ENST00000218328 CCAR2Q8N163 923 aaKnown RBP21.77■■□□□ 1.08
HUWE1-201ENST00000218328 RUNDC1Q96C34 613 aa21.77■■□□□ 1.08
HUWE1-201ENST00000218328 ZNF592Q92610 1267 aa21.76■■□□□ 1.07
HUWE1-201ENST00000218328 TSR1Q2NL82 804 aaKnown RBP21.75■■□□□ 1.07
HUWE1-201ENST00000218328 C22orf23Q9BZE7 217 aa21.75■■□□□ 1.07
HUWE1-201ENST00000218328 TMX4Q9H1E5 349 aaPredicted RBP21.75■■□□□ 1.07
HUWE1-201ENST00000218328 FRAT2O75474 233 aaPredicted RBP21.75■■□□□ 1.07
HUWE1-201ENST00000218328 NUCB2P80303 420 aa21.74■■□□□ 1.07
HUWE1-201ENST00000218328 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
HUWE1-201ENST00000218328 PDE4CQ08493 712 aa21.74■■□□□ 1.07
HUWE1-201ENST00000218328 ANO2Q9NQ90 1003 aa21.74■■□□□ 1.07
HUWE1-201ENST00000218328 C1orf141Q5JVX7 400 aa21.73■■□□□ 1.07
HUWE1-201ENST00000218328 INTS3Q68E01 1043 aaKnown RBP21.73■■□□□ 1.07
HUWE1-201ENST00000218328 MARCH6O60337 910 aa21.73■■□□□ 1.07
HUWE1-201ENST00000218328 TPM1P09493 284 aa21.73■■□□□ 1.07
HUWE1-201ENST00000218328 FAM13BQ9NYF5 915 aa21.73■■□□□ 1.07
HUWE1-201ENST00000218328 ROCK1Q13464 1354 aa21.72■■□□□ 1.07
HUWE1-201ENST00000218328 TEFQ10587 303 aa21.72■■□□□ 1.07
HUWE1-201ENST00000218328 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.72■■□□□ 1.07
HUWE1-201ENST00000218328 FAM43AQ8N2R8 423 aa21.72■■□□□ 1.07
HUWE1-201ENST00000218328 LNPKQ9C0E8 428 aa21.72■■□□□ 1.07
HUWE1-201ENST00000218328 AKAP17AQ02040 695 aaKnown RBP21.71■■□□□ 1.07
HUWE1-201ENST00000218328 C9orf78Q9NZ63 289 aaPredicted RBP21.71■■□□□ 1.07
HUWE1-201ENST00000218328 AAMPQ13685 434 aa21.71■■□□□ 1.07
HUWE1-201ENST00000218328 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.07
HUWE1-201ENST00000218328 IFIT2P09913 472 aaKnown RBP21.7■■□□□ 1.06
HUWE1-201ENST00000218328 GPS2Q13227 327 aa21.7■■□□□ 1.06
HUWE1-201ENST00000218328 CPLX2Q6PUV4 134 aaKnown RBP21.7■■□□□ 1.06
HUWE1-201ENST00000218328 CEP89Q96ST8 783 aa21.7■■□□□ 1.06
HUWE1-201ENST00000218328 NEXNQ0ZGT2 675 aa21.69■■□□□ 1.06
HUWE1-201ENST00000218328 PANK1Q8TE04 598 aa21.69■■□□□ 1.06
HUWE1-201ENST00000218328 SYNE3Q6ZMZ3 975 aa21.69■■□□□ 1.06
HUWE1-201ENST00000218328 ZNF771Q7L3S4 317 aaPredicted RBP21.69■■□□□ 1.06
HUWE1-201ENST00000218328 BICD2Q8TD16 824 aa21.69■■□□□ 1.06
HUWE1-201ENST00000218328 LRRFIP1Q32MZ4 808 aaKnown RBP21.69■■□□□ 1.06
HUWE1-201ENST00000218328 MYOM3Q5VTT5 1437 aa21.68■■□□□ 1.06
HUWE1-201ENST00000218328 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
HUWE1-201ENST00000218328 GTF2E1P29083 439 aaPredicted RBP21.68■■□□□ 1.06
HUWE1-201ENST00000218328 SMC3Q9UQE7 1217 aa21.67■■□□□ 1.06
HUWE1-201ENST00000218328 RNF20Q5VTR2 975 aa21.66■■□□□ 1.06
HUWE1-201ENST00000218328 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
HUWE1-201ENST00000218328 BRD4O60885 1362 aaPredicted RBP21.66■■□□□ 1.06
HUWE1-201ENST00000218328 WASHC2AQ641Q2 1341 aa21.66■■□□□ 1.06
HUWE1-201ENST00000218328 VPS37CA5D8V6 355 aaPredicted RBP21.66■■□□□ 1.06
HUWE1-201ENST00000218328 TPM2P07951 284 aa21.66■■□□□ 1.06
HUWE1-201ENST00000218328 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
HUWE1-201ENST00000218328 FKBP5Q13451 457 aaPredicted RBP21.65■■□□□ 1.06
HUWE1-201ENST00000218328 MRE11P49959 708 aa21.65■■□□□ 1.06
HUWE1-201ENST00000218328 GNAI1P63096 354 aa21.65■■□□□ 1.06
HUWE1-201ENST00000218328 TRIM29Q14134 588 aa21.65■■□□□ 1.06
HUWE1-201ENST00000218328 CCDC70Q6NSX1 233 aa21.64■■□□□ 1.06
HUWE1-201ENST00000218328 VPS53Q5VIR6 699 aa21.64■■□□□ 1.05
HUWE1-201ENST00000218328 G3V3G9 751 aa21.64■■□□□ 1.05
HUWE1-201ENST00000218328 CPLX1O14810 134 aa21.64■■□□□ 1.05
HUWE1-201ENST00000218328 DCAF8Q5TAQ9 597 aa21.64■■□□□ 1.05
HUWE1-201ENST00000218328 SETQ01105 290 aaPredicted RBP21.63■■□□□ 1.05
HUWE1-201ENST00000218328 HOMER1Q86YM7 354 aa21.63■■□□□ 1.05
HUWE1-201ENST00000218328 MIA2Q96PC5 1412 aa21.62■■□□□ 1.05
HUWE1-201ENST00000218328 CDC45O75419 566 aa21.62■■□□□ 1.05
HUWE1-201ENST00000218328 SASS6Q6UVJ0 657 aa21.62■■□□□ 1.05
HUWE1-201ENST00000218328 ADAMTS8Q9UP79 889 aa21.62■■□□□ 1.05
HUWE1-201ENST00000218328 PTPRGP23470 1445 aa21.61■■□□□ 1.05
HUWE1-201ENST00000218328 G3BP1Q13283 466 aaKnown RBP eCLIP21.61■■□□□ 1.052e-7■■■□□ 16.1
HUWE1-201ENST00000218328 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
HUWE1-201ENST00000218328 NASPP49321 788 aaPredicted RBP21.59■■□□□ 1.05
HUWE1-201ENST00000218328 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
HUWE1-201ENST00000218328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.59■■□□□ 1.05
HUWE1-201ENST00000218328 CDCA7LQ96GN5 454 aa21.59■■□□□ 1.05
HUWE1-201ENST00000218328 IPO7O95373 1038 aaKnown RBP21.59■■□□□ 1.05
HUWE1-201ENST00000218328 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.59■■□□□ 1.05
HUWE1-201ENST00000218328 CUX1P39880 1505 aa21.58■■□□□ 1.05
HUWE1-201ENST00000218328 DDX58O95786 925 aaKnown RBP21.58■■□□□ 1.05
HUWE1-201ENST00000218328 HSP90AB4PQ58FF6 505 aa21.58■■□□□ 1.05
HUWE1-201ENST00000218328 ANKRD20A12PQ8NF67 263 aa21.58■■□□□ 1.04
HUWE1-201ENST00000218328 STAC3Q96MF2 364 aa21.58■■□□□ 1.04
HUWE1-201ENST00000218328 HOOK1Q9UJC3 728 aaKnown RBP21.58■■□□□ 1.04
HUWE1-201ENST00000218328 ZNF644Q9H582 1327 aaPredicted RBP21.57■■□□□ 1.04
HUWE1-201ENST00000218328 TRAK2O60296 914 aa21.57■■□□□ 1.04
HUWE1-201ENST00000218328 APPP05067 770 aa21.57■■□□□ 1.04
HUWE1-201ENST00000218328 TEX35Q5T0J7 233 aa21.57■■□□□ 1.04
HUWE1-201ENST00000218328 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
HUWE1-201ENST00000218328 TSPYL4Q9UJ04 414 aa21.57■■□□□ 1.04
HUWE1-201ENST00000218328 ERC2O15083 957 aa21.57■■□□□ 1.04
HUWE1-201ENST00000218328 KIF21BO75037 1637 aa21.56■■□□□ 1.04
HUWE1-201ENST00000218328 HMOX1P09601 288 aa21.56■■□□□ 1.04
HUWE1-201ENST00000218328 PCMTD1Q96MG8 357 aaPredicted RBP21.56■■□□□ 1.04
HUWE1-201ENST00000218328 TRDNQ13061 729 aa21.56■■□□□ 1.04
HUWE1-201ENST00000218328 CCDC39Q9UFE4 941 aa21.56■■□□□ 1.04
HUWE1-201ENST00000218328 IGF1RP08069 1367 aa21.56■■□□□ 1.04
HUWE1-201ENST00000218328 CCDC73Q6ZRK6 1079 aa21.56■■□□□ 1.04
HUWE1-201ENST00000218328 FANCD2Q9BXW9 1451 aa21.55■■□□□ 1.04
HUWE1-201ENST00000218328 LRRC9Q6ZRR7 1453 aa21.55■■□□□ 1.04
HUWE1-201ENST00000218328 R3HCC1Q9Y3T6 440 aaKnown RBP21.54■■□□□ 1.04
HUWE1-201ENST00000218328 FBXW7Q969H0 707 aa21.54■■□□□ 1.04
HUWE1-201ENST00000218328 CCDC47Q96A33 483 aaKnown RBP21.53■■□□□ 1.04
HUWE1-201ENST00000218328 GGNBP2Q9H3C7 697 aa21.53■■□□□ 1.04
HUWE1-201ENST00000218328 RNF214Q8ND24 703 aa21.51■■□□□ 1.03
HUWE1-201ENST00000218328 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms