RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 ADGRB3O60242 1522 aa23.43■■□□□ 1.34
CHGA-201ENST00000216492 CCDC7Q96M83 1385 aa23.41■■□□□ 1.34
CHGA-201ENST00000216492 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
CHGA-201ENST00000216492 CLTCQ00610 1675 aaKnown RBP23.4■■□□□ 1.34
CHGA-201ENST00000216492 MYOM2P54296 1465 aa23.4■■□□□ 1.34
CHGA-201ENST00000216492 KIF7Q2M1P5 1343 aa23.4■■□□□ 1.34
CHGA-201ENST00000216492 PIK3C2BO00750 1634 aa23.39■■□□□ 1.34
CHGA-201ENST00000216492 MADDQ8WXG6 1647 aa23.39■■□□□ 1.33
CHGA-201ENST00000216492 CFAP70Q5T0N1 1121 aa23.39■■□□□ 1.33
CHGA-201ENST00000216492 PREX1Q8TCU6 1659 aa23.39■■□□□ 1.33
CHGA-201ENST00000216492 VGFO15240 615 aaPredicted RBP23.37■■□□□ 1.33
CHGA-201ENST00000216492 MROH2AA6NES4 1674 aa23.37■■□□□ 1.33
CHGA-201ENST00000216492 STAG3Q9UJ98 1225 aa23.37■■□□□ 1.33
CHGA-201ENST00000216492 NUTM2DQ5VT03 806 aaPredicted RBP23.34■■□□□ 1.33
CHGA-201ENST00000216492 NRXN1Q9ULB1 1477 aa23.33■■□□□ 1.33
CHGA-201ENST00000216492 POLR3GLQ9BT43 218 aa23.32■■□□□ 1.32
CHGA-201ENST00000216492 LAMC1P11047 1609 aa23.32■■□□□ 1.32
CHGA-201ENST00000216492 SPATA31D1Q6ZQQ2 1576 aa23.31■■□□□ 1.32
CHGA-201ENST00000216492 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
CHGA-201ENST00000216492 IFT172Q9UG01 1749 aa23.29■■□□□ 1.32
CHGA-201ENST00000216492 TESK2Q96S53 571 aa23.29■■□□□ 1.32
CHGA-201ENST00000216492 PIK3C2GO75747 1445 aa23.28■■□□□ 1.32
CHGA-201ENST00000216492 SCAF11Q99590 1463 aaKnown RBP23.27■■□□□ 1.32
CHGA-201ENST00000216492 TMEM131LA2VDJ0 1609 aa23.27■■□□□ 1.32
CHGA-201ENST00000216492 CEBPAP49715 358 aaPredicted RBP23.26■■□□□ 1.31
CHGA-201ENST00000216492 NEFLP07196 543 aa23.26■■□□□ 1.31
CHGA-201ENST00000216492 NEXMIFQ5QGS0 1516 aa23.26■■□□□ 1.31
CHGA-201ENST00000216492 PPLO60437 1756 aa23.26■■□□□ 1.31
CHGA-201ENST00000216492 ZFYVE9O95405 1425 aa23.25■■□□□ 1.31
CHGA-201ENST00000216492 KIAA1210Q9ULL0 1709 aa23.24■■□□□ 1.31
CHGA-201ENST00000216492 TNRQ92752 1358 aa23.24■■□□□ 1.31
CHGA-201ENST00000216492 TMF1P82094 1093 aa23.23■■□□□ 1.31
CHGA-201ENST00000216492 POLR1AO95602 1720 aaPredicted RBP23.23■■□□□ 1.31
CHGA-201ENST00000216492 TMEM132EQ6IEE7 984 aa23.22■■□□□ 1.31
CHGA-201ENST00000216492 EIF3AQ14152 1382 aaKnown RBP23.21■■□□□ 1.31
CHGA-201ENST00000216492 A2ML1A8K2U0 1454 aa23.21■■□□□ 1.31
CHGA-201ENST00000216492 FKBP8Q14318 412 aa23.2■■□□□ 1.3
CHGA-201ENST00000216492 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
CHGA-201ENST00000216492 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
CHGA-201ENST00000216492 TRAK1Q9UPV9 953 aa23.18■■□□□ 1.3
CHGA-201ENST00000216492 DISP3Q9P2K9 1392 aa23.16■■□□□ 1.3
CHGA-201ENST00000216492 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
CHGA-201ENST00000216492 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
CHGA-201ENST00000216492 SETBP1Q9Y6X0 1596 aa23.15■■□□□ 1.3
CHGA-201ENST00000216492 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
CHGA-201ENST00000216492 MYO5BQ9ULV0 1848 aa23.15■■□□□ 1.3
CHGA-201ENST00000216492 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.15■■□□□ 1.3
CHGA-201ENST00000216492 HNRNPUQ00839 825 aaKnown RBP eCLIP23.14■■□□□ 1.29
CHGA-201ENST00000216492 RIMS2Q9UQ26 1411 aa23.14■■□□□ 1.29
CHGA-201ENST00000216492 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
CHGA-201ENST00000216492 CDCA8Q53HL2 280 aa23.12■■□□□ 1.29
CHGA-201ENST00000216492 PRKRIP1Q9H875 184 aaPredicted RBP23.12■■□□□ 1.29
CHGA-201ENST00000216492 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
CHGA-201ENST00000216492 NLRP1Q9C000 1473 aa23.09■■□□□ 1.29
CHGA-201ENST00000216492 BCANQ96GW7 911 aa23.09■■□□□ 1.29
CHGA-201ENST00000216492 FER1L4A9Z1Z3 1794 aa23.08■■□□□ 1.29
CHGA-201ENST00000216492 STK26Q9P289 416 aa23.07■■□□□ 1.28
CHGA-201ENST00000216492 TMEM2Q9UHN6 1383 aa23.06■■□□□ 1.28
CHGA-201ENST00000216492 C3P01024 1663 aa23.06■■□□□ 1.28
CHGA-201ENST00000216492 SBNO2Q9Y2G9 1366 aa23.04■■□□□ 1.28
CHGA-201ENST00000216492 PANK3Q9H999 370 aa23.02■■□□□ 1.28
CHGA-201ENST00000216492 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
CHGA-201ENST00000216492 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.28
CHGA-201ENST00000216492 ALKQ9UM73 1620 aa23.02■■□□□ 1.28
CHGA-201ENST00000216492 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
CHGA-201ENST00000216492 THEMISQ8N1K5 641 aaPredicted RBP23.01■■□□□ 1.27
CHGA-201ENST00000216492 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
CHGA-201ENST00000216492 TXNDC2Q86VQ3 553 aa23■■□□□ 1.27
CHGA-201ENST00000216492 KDM5AP29375 1690 aaKnown RBP23■■□□□ 1.27
CHGA-201ENST00000216492 LTKP29376 864 aa22.99■■□□□ 1.27
CHGA-201ENST00000216492 EID1Q9Y6B2 187 aa22.99■■□□□ 1.27
CHGA-201ENST00000216492 YTHDC2Q9H6S0 1430 aaKnown RBP22.99■■□□□ 1.27
CHGA-201ENST00000216492 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
CHGA-201ENST00000216492 ASXL1Q8IXJ9 1541 aa22.97■■□□□ 1.27
CHGA-201ENST00000216492 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHGA-201ENST00000216492 CCDC184Q52MB2 194 aa22.97■■□□□ 1.27
CHGA-201ENST00000216492 MYO3AQ8NEV4 1616 aa22.97■■□□□ 1.27
CHGA-201ENST00000216492 POGKQ9P215 609 aa22.96■■□□□ 1.27
CHGA-201ENST00000216492 PRAM1Q96QH2 718 aa22.96■■□□□ 1.27
CHGA-201ENST00000216492 PTPRMP28827 1452 aa22.94■■□□□ 1.26
CHGA-201ENST00000216492 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
CHGA-201ENST00000216492 ADAMTSL3P82987 1691 aa22.94■■□□□ 1.26
CHGA-201ENST00000216492 RIMS1Q86UR5 1692 aaKnown RBP22.94■■□□□ 1.26
CHGA-201ENST00000216492 EVC2Q86UK5 1308 aa22.93■■□□□ 1.26
CHGA-201ENST00000216492 ZBED9Q6R2W3 1325 aa22.92■■□□□ 1.26
CHGA-201ENST00000216492 METP08581 1390 aa22.92■■□□□ 1.26
CHGA-201ENST00000216492 LRPPRCP42704 1394 aaKnown RBP22.92■■□□□ 1.26
CHGA-201ENST00000216492 PLEKHG1Q9ULL1 1385 aa22.91■■□□□ 1.26
CHGA-201ENST00000216492 ABCC11Q96J66 1382 aa22.9■■□□□ 1.26
CHGA-201ENST00000216492 RALBP1Q15311 655 aa22.9■■□□□ 1.26
CHGA-201ENST00000216492 PUS7Q96PZ0 661 aaKnown RBP22.9■■□□□ 1.26
CHGA-201ENST00000216492 KNSTRNQ9Y448 316 aa22.89■■□□□ 1.26
CHGA-201ENST00000216492 ARHGAP23Q9P227 1491 aa22.88■■□□□ 1.25
CHGA-201ENST00000216492 SLIT1O75093 1534 aa22.88■■□□□ 1.25
CHGA-201ENST00000216492 ARHGEF28Q8N1W1 1705 aaKnown RBP22.88■■□□□ 1.25
CHGA-201ENST00000216492 ERICH6BQ5W0A0 696 aa22.88■■□□□ 1.25
CHGA-201ENST00000216492 WAPLQ7Z5K2 1190 aa22.88■■□□□ 1.25
CHGA-201ENST00000216492 KTN1Q86UP2 1357 aaKnown RBP22.88■■□□□ 1.25
CHGA-201ENST00000216492 QRICH2Q9H0J4 1663 aa22.88■■□□□ 1.25
CHGA-201ENST00000216492 NRXN3Q9Y4C0 1643 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms