RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
EFNB1-201ENST00000204961 SAMD9LQ8IVG5 1584 aa19.61■□□□□ 0.73
EFNB1-201ENST00000204961 SCAPERQ9BY12 1400 aa19.61■□□□□ 0.73
EFNB1-201ENST00000204961 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
EFNB1-201ENST00000204961 IGHDP01880 384 aa19.58■□□□□ 0.73
EFNB1-201ENST00000204961 MAGI2Q86UL8 1455 aa19.58■□□□□ 0.73
EFNB1-201ENST00000204961 FBLN1P23142 703 aa19.58■□□□□ 0.72
EFNB1-201ENST00000204961 ARHGEF12Q9NZN5 1544 aa19.58■□□□□ 0.72
EFNB1-201ENST00000204961 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
EFNB1-201ENST00000204961 ABCA8O94911 1581 aa19.57■□□□□ 0.72
EFNB1-201ENST00000204961 U2AF1L5P0DN76 240 aaPredicted RBP19.55■□□□□ 0.72
EFNB1-201ENST00000204961 U2AF1Q01081 240 aaKnown RBP eCLIP19.55■□□□□ 0.72
EFNB1-201ENST00000204961 TTC37Q6PGP7 1564 aa19.55■□□□□ 0.72
EFNB1-201ENST00000204961 KDM5DQ9BY66 1539 aa19.55■□□□□ 0.72
EFNB1-201ENST00000204961 SLFN5Q08AF3 891 aa19.54■□□□□ 0.72
EFNB1-201ENST00000204961 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
EFNB1-201ENST00000204961 CABP2Q9NPB3 220 aa19.54■□□□□ 0.72
EFNB1-201ENST00000204961 BRPF3Q9ULD4 1205 aa19.54■□□□□ 0.72
EFNB1-201ENST00000204961 CDCA8Q53HL2 280 aa19.54■□□□□ 0.72
EFNB1-201ENST00000204961 SEC24BO95487 1268 aa19.53■□□□□ 0.72
EFNB1-201ENST00000204961 COL17A1Q9UMD9 1497 aaPredicted RBP19.52■□□□□ 0.72
EFNB1-201ENST00000204961 MTHFSP49914 203 aa19.52■□□□□ 0.72
EFNB1-201ENST00000204961 TSR2Q969E8 191 aaKnown RBP19.52■□□□□ 0.72
EFNB1-201ENST00000204961 FRAT2O75474 233 aaPredicted RBP19.52■□□□□ 0.72
EFNB1-201ENST00000204961 NFKBIBQ15653 356 aa19.51■□□□□ 0.71
EFNB1-201ENST00000204961 CROCC2H7BZ55 1655 aa19.51■□□□□ 0.71
EFNB1-201ENST00000204961 TCP11L2Q8N4U5 519 aa19.5■□□□□ 0.71
EFNB1-201ENST00000204961 UGGT1Q9NYU2 1555 aa19.5■□□□□ 0.71
EFNB1-201ENST00000204961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.71
EFNB1-201ENST00000204961 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
EFNB1-201ENST00000204961 CDC42BPBQ9Y5S2 1711 aa19.49■□□□□ 0.71
EFNB1-201ENST00000204961 CENPQQ7L2Z9 268 aaPredicted RBP19.49■□□□□ 0.71
EFNB1-201ENST00000204961 CENPJQ9HC77 1338 aaPredicted RBP19.49■□□□□ 0.71
EFNB1-201ENST00000204961 RAPGEF3O95398 923 aa19.48■□□□□ 0.71
EFNB1-201ENST00000204961 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
EFNB1-201ENST00000204961 SHANK2Q9UPX8 1470 aa19.48■□□□□ 0.71
EFNB1-201ENST00000204961 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
EFNB1-201ENST00000204961 POLR1AO95602 1720 aaPredicted RBP19.47■□□□□ 0.71
EFNB1-201ENST00000204961 EIF5BO60841 1220 aaKnown RBP19.47■□□□□ 0.71
EFNB1-201ENST00000204961 ELL2O00472 640 aaPredicted RBP19.46■□□□□ 0.71
EFNB1-201ENST00000204961 MS4A1P11836 297 aa19.46■□□□□ 0.71
EFNB1-201ENST00000204961 WWC1Q8IX03 1113 aa19.46■□□□□ 0.71
EFNB1-201ENST00000204961 RLBP1P12271 317 aa19.45■□□□□ 0.7
EFNB1-201ENST00000204961 C8orf34Q49A92 452 aa19.45■□□□□ 0.7
EFNB1-201ENST00000204961 KANK1Q14678 1352 aa19.45■□□□□ 0.7
EFNB1-201ENST00000204961 MINK1Q8N4C8 1332 aaPredicted RBP19.45■□□□□ 0.7
EFNB1-201ENST00000204961 WASHC2CQ9Y4E1 1318 aa19.45■□□□□ 0.7
EFNB1-201ENST00000204961 MLECQ14165 292 aa19.44■□□□□ 0.7
EFNB1-201ENST00000204961 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
EFNB1-201ENST00000204961 DDRGK1Q96HY6 314 aa19.43■□□□□ 0.7
EFNB1-201ENST00000204961 ADCY10Q96PN6 1610 aa19.42■□□□□ 0.7
EFNB1-201ENST00000204961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.42■□□□□ 0.7
EFNB1-201ENST00000204961 TRPM1Q7Z4N2 1603 aa19.42■□□□□ 0.7
EFNB1-201ENST00000204961 WDR7Q9Y4E6 1490 aa19.42■□□□□ 0.7
EFNB1-201ENST00000204961 GPRASP1Q5JY77 1395 aa19.41■□□□□ 0.7
EFNB1-201ENST00000204961 E9PSI1 815 aa19.41■□□□□ 0.7
EFNB1-201ENST00000204961 SOX12O15370 315 aa19.4■□□□□ 0.7
EFNB1-201ENST00000204961 GZF1Q9H116 711 aaPredicted RBP19.4■□□□□ 0.7
EFNB1-201ENST00000204961 FTSJ3Q8IY81 847 aaKnown RBP19.4■□□□□ 0.7
EFNB1-201ENST00000204961 STAG3Q9UJ98 1225 aa19.4■□□□□ 0.7
EFNB1-201ENST00000204961 KDM2BQ8NHM5 1336 aa19.39■□□□□ 0.7
EFNB1-201ENST00000204961 PCDHB15Q9Y5E8 787 aa19.39■□□□□ 0.69
EFNB1-201ENST00000204961 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
EFNB1-201ENST00000204961 PLCH2O75038 1416 aa19.38■□□□□ 0.69
EFNB1-201ENST00000204961 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
EFNB1-201ENST00000204961 BLMP54132 1417 aaPredicted RBP19.37■□□□□ 0.69
EFNB1-201ENST00000204961 ITPRIPQ8IWB1 547 aa19.36■□□□□ 0.69
EFNB1-201ENST00000204961 NOS1P29475 1434 aa19.36■□□□□ 0.69
EFNB1-201ENST00000204961 POGKQ9P215 609 aa19.36■□□□□ 0.69
EFNB1-201ENST00000204961 MFAP1P55081 439 aaKnown RBP19.35■□□□□ 0.69
EFNB1-201ENST00000204961 THUMPD2Q9BTF0 503 aaKnown RBP19.35■□□□□ 0.69
EFNB1-201ENST00000204961 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
EFNB1-201ENST00000204961 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
EFNB1-201ENST00000204961 EIF3AQ14152 1382 aaKnown RBP19.34■□□□□ 0.69
EFNB1-201ENST00000204961 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
EFNB1-201ENST00000204961 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
EFNB1-201ENST00000204961 ZNF521Q96K83 1311 aa19.33■□□□□ 0.69
EFNB1-201ENST00000204961 PREX2Q70Z35 1606 aa19.33■□□□□ 0.69
EFNB1-201ENST00000204961 GSE1Q14687 1217 aa19.33■□□□□ 0.69
EFNB1-201ENST00000204961 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.69
EFNB1-201ENST00000204961 ARHGEF5Q12774 1597 aa19.33■□□□□ 0.68
EFNB1-201ENST00000204961 HMOX1P09601 288 aa19.33■□□□□ 0.68
EFNB1-201ENST00000204961 EXOSC9Q06265 439 aaKnown RBP19.33■□□□□ 0.68
EFNB1-201ENST00000204961 CFAP53Q96M91 514 aa19.33■□□□□ 0.68
EFNB1-201ENST00000204961 ZMYM4Q5VZL5 1548 aa19.32■□□□□ 0.68
EFNB1-201ENST00000204961 ATP10AO60312 1499 aa19.32■□□□□ 0.68
EFNB1-201ENST00000204961 CHD1O14646 1710 aa19.31■□□□□ 0.68
EFNB1-201ENST00000204961 RARSP54136 660 aaKnown RBP19.31■□□□□ 0.68
EFNB1-201ENST00000204961 RUNDC1Q96C34 613 aa19.31■□□□□ 0.68
EFNB1-201ENST00000204961 PRDM15P57071 1507 aaPredicted RBP19.31■□□□□ 0.68
EFNB1-201ENST00000204961 DUOX2Q9NRD8 1548 aa19.31■□□□□ 0.68
EFNB1-201ENST00000204961 C1orf115Q9H7X2 142 aa19.3■□□□□ 0.68
EFNB1-201ENST00000204961 APBB1O00213 710 aa19.29■□□□□ 0.68
EFNB1-201ENST00000204961 ASXL1Q8IXJ9 1541 aa19.28■□□□□ 0.68
EFNB1-201ENST00000204961 FANCAO15360 1455 aa19.28■□□□□ 0.68
EFNB1-201ENST00000204961 FBXO31Q5XUX0 539 aaPredicted RBP19.28■□□□□ 0.68
EFNB1-201ENST00000204961 NKTRP30414 1462 aaKnown RBP19.27■□□□□ 0.68
EFNB1-201ENST00000204961 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.68
EFNB1-201ENST00000204961 MAPK8IP3Q9UPT6 1336 aa19.27■□□□□ 0.68
EFNB1-201ENST00000204961 ADGRL1O94910 1474 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms