RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 NAP1L5Q96NT1 182 aaPredicted RBP16.7■□□□□ 0.26
PCDHB4-201ENST00000194152 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
PCDHB4-201ENST00000194152 ERBINQ96RT1 1412 aa16.7■□□□□ 0.26
PCDHB4-201ENST00000194152 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
PCDHB4-201ENST00000194152 RRP1P56182 461 aaKnown RBP16.69■□□□□ 0.26
PCDHB4-201ENST00000194152 IDI1Q13907 227 aa16.69■□□□□ 0.26
PCDHB4-201ENST00000194152 GSE1Q14687 1217 aa16.69■□□□□ 0.26
PCDHB4-201ENST00000194152 MTHFSP49914 203 aa16.69■□□□□ 0.26
PCDHB4-201ENST00000194152 VGFO15240 615 aaPredicted RBP16.69■□□□□ 0.26
PCDHB4-201ENST00000194152 PRAM1Q96QH2 718 aa16.68■□□□□ 0.26
PCDHB4-201ENST00000194152 DNMT1P26358 1616 aaKnown RBP16.68■□□□□ 0.26
PCDHB4-201ENST00000194152 RBM33Q96EV2 1170 aaKnown RBP16.68■□□□□ 0.26
PCDHB4-201ENST00000194152 WAPLQ7Z5K2 1190 aa16.67■□□□□ 0.26
PCDHB4-201ENST00000194152 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
PCDHB4-201ENST00000194152 CEBPAP49715 358 aaPredicted RBP16.66■□□□□ 0.26
PCDHB4-201ENST00000194152 TESK2Q96S53 571 aa16.66■□□□□ 0.26
PCDHB4-201ENST00000194152 TEX14Q8IWB6 1497 aa16.66■□□□□ 0.26
PCDHB4-201ENST00000194152 PLCH2O75038 1416 aa16.66■□□□□ 0.26
PCDHB4-201ENST00000194152 TXNDC2Q86VQ3 553 aa16.66■□□□□ 0.26
PCDHB4-201ENST00000194152 C20orf194Q5TEA3 1177 aa16.66■□□□□ 0.26
PCDHB4-201ENST00000194152 HMOX1P09601 288 aa16.65■□□□□ 0.26
PCDHB4-201ENST00000194152 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
PCDHB4-201ENST00000194152 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
PCDHB4-201ENST00000194152 NUTM2GQ5VZR2 741 aa16.65■□□□□ 0.26
PCDHB4-201ENST00000194152 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
PCDHB4-201ENST00000194152 FAM135AQ9P2D6 1515 aa16.65■□□□□ 0.26
PCDHB4-201ENST00000194152 BCAR3O75815 825 aa16.64■□□□□ 0.25
PCDHB4-201ENST00000194152 LTV1Q96GA3 475 aaPredicted RBP16.63■□□□□ 0.25
PCDHB4-201ENST00000194152 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
PCDHB4-201ENST00000194152 MBD5Q9P267 1494 aa16.62■□□□□ 0.25
PCDHB4-201ENST00000194152 APBB1O00213 710 aa16.61■□□□□ 0.25
PCDHB4-201ENST00000194152 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
PCDHB4-201ENST00000194152 HDGFL2Q7Z4V5 671 aaPredicted RBP16.61■□□□□ 0.25
PCDHB4-201ENST00000194152 PANK1Q8TE04 598 aa16.61■□□□□ 0.25
PCDHB4-201ENST00000194152 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
PCDHB4-201ENST00000194152 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
PCDHB4-201ENST00000194152 PDE4AP27815 886 aa16.6■□□□□ 0.25
PCDHB4-201ENST00000194152 USP35Q9P2H5 1018 aa16.6■□□□□ 0.25
PCDHB4-201ENST00000194152 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
PCDHB4-201ENST00000194152 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
PCDHB4-201ENST00000194152 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
PCDHB4-201ENST00000194152 BRD4O60885 1362 aaPredicted RBP16.59■□□□□ 0.25
PCDHB4-201ENST00000194152 NOS1P29475 1434 aa16.59■□□□□ 0.25
PCDHB4-201ENST00000194152 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
PCDHB4-201ENST00000194152 PRAG1Q86YV5 1406 aa16.57■□□□□ 0.24
PCDHB4-201ENST00000194152 TCP11L2Q8N4U5 519 aa16.57■□□□□ 0.24
PCDHB4-201ENST00000194152 NFKBIBQ15653 356 aa16.57■□□□□ 0.24
PCDHB4-201ENST00000194152 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
PCDHB4-201ENST00000194152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.56■□□□□ 0.24
PCDHB4-201ENST00000194152 CGNL1Q0VF96 1302 aa16.56■□□□□ 0.24
PCDHB4-201ENST00000194152 ARHGEF12Q9NZN5 1544 aa16.56■□□□□ 0.24
PCDHB4-201ENST00000194152 PER1O15534 1290 aaPredicted RBP16.56■□□□□ 0.24
PCDHB4-201ENST00000194152 PMFBP1Q8TBY8 1022 aa16.56■□□□□ 0.24
PCDHB4-201ENST00000194152 TERF2IPQ9NYB0 399 aa16.56■□□□□ 0.24
PCDHB4-201ENST00000194152 ABCA8O94911 1581 aa16.55■□□□□ 0.24
PCDHB4-201ENST00000194152 NCKAP5LQ9HCH0 1330 aa16.55■□□□□ 0.24
PCDHB4-201ENST00000194152 CARD14Q9BXL6 1004 aa16.55■□□□□ 0.24
PCDHB4-201ENST00000194152 UPF2Q9HAU5 1272 aaKnown RBP16.55■□□□□ 0.24
PCDHB4-201ENST00000194152 CHD1O14646 1710 aa16.54■□□□□ 0.24
PCDHB4-201ENST00000194152 TTC37Q6PGP7 1564 aa16.54■□□□□ 0.24
PCDHB4-201ENST00000194152 ABCC2Q92887 1545 aa16.54■□□□□ 0.24
PCDHB4-201ENST00000194152 DDRGK1Q96HY6 314 aa16.54■□□□□ 0.24
PCDHB4-201ENST00000194152 A2MP01023 1474 aa16.54■□□□□ 0.24
PCDHB4-201ENST00000194152 SMC4Q9NTJ3 1288 aa16.54■□□□□ 0.24
PCDHB4-201ENST00000194152 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
PCDHB4-201ENST00000194152 ZMYND15Q9H091 742 aa16.53■□□□□ 0.24
PCDHB4-201ENST00000194152 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
PCDHB4-201ENST00000194152 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.24
PCDHB4-201ENST00000194152 CDK19Q9BWU1 502 aa16.52■□□□□ 0.24
PCDHB4-201ENST00000194152 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
PCDHB4-201ENST00000194152 WDR7Q9Y4E6 1490 aa16.52■□□□□ 0.23
PCDHB4-201ENST00000194152 SAMD9LQ8IVG5 1584 aa16.51■□□□□ 0.23
PCDHB4-201ENST00000194152 A0A0G2JS52 829 aa16.51■□□□□ 0.23
PCDHB4-201ENST00000194152 NGDNQ8NEJ9 315 aaKnown RBP16.51■□□□□ 0.23
PCDHB4-201ENST00000194152 ZNF428Q96B54 188 aa16.51■□□□□ 0.23
PCDHB4-201ENST00000194152 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
PCDHB4-201ENST00000194152 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
PCDHB4-201ENST00000194152 RRS1Q15050 365 aaKnown RBP16.51■□□□□ 0.23
PCDHB4-201ENST00000194152 PDE3BQ13370 1112 aa16.5■□□□□ 0.23
PCDHB4-201ENST00000194152 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
PCDHB4-201ENST00000194152 UGGT1Q9NYU2 1555 aa16.5■□□□□ 0.23
PCDHB4-201ENST00000194152 HSP90AA1P07900 732 aaKnown RBP16.5■□□□□ 0.23
PCDHB4-201ENST00000194152 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
PCDHB4-201ENST00000194152 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
PCDHB4-201ENST00000194152 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
PCDHB4-201ENST00000194152 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
PCDHB4-201ENST00000194152 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
PCDHB4-201ENST00000194152 RIPK4P57078 832 aa16.49■□□□□ 0.23
PCDHB4-201ENST00000194152 NSD3Q9BZ95 1437 aa16.49■□□□□ 0.23
PCDHB4-201ENST00000194152 ADGRL2O95490 1459 aa16.49■□□□□ 0.23
PCDHB4-201ENST00000194152 ZRANB1Q9UGI0 708 aa16.48■□□□□ 0.23
PCDHB4-201ENST00000194152 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
PCDHB4-201ENST00000194152 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
PCDHB4-201ENST00000194152 FRAT2O75474 233 aaPredicted RBP16.47■□□□□ 0.23
PCDHB4-201ENST00000194152 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
PCDHB4-201ENST00000194152 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
PCDHB4-201ENST00000194152 DIAPH1O60610 1272 aaKnown RBP16.44■□□□□ 0.22
PCDHB4-201ENST00000194152 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
PCDHB4-201ENST00000194152 CDC42BPAQ5VT25 1732 aa16.44■□□□□ 0.22
PCDHB4-201ENST00000194152 DUOX2Q9NRD8 1548 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms