RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
PDZD4-201ENST00000164640 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
PDZD4-201ENST00000164640 CDCA8Q53HL2 280 aa18.94■□□□□ 0.62
PDZD4-201ENST00000164640 FSD2A1L4K1 749 aa18.94■□□□□ 0.62
PDZD4-201ENST00000164640 NASPP49321 788 aaPredicted RBP18.93■□□□□ 0.62
PDZD4-201ENST00000164640 BLMP54132 1417 aaPredicted RBP18.93■□□□□ 0.62
PDZD4-201ENST00000164640 NESP48681 1621 aa18.93■□□□□ 0.62
PDZD4-201ENST00000164640 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
PDZD4-201ENST00000164640 PDCL3Q9H2J4 239 aa18.92■□□□□ 0.62
PDZD4-201ENST00000164640 ERBINQ96RT1 1412 aa18.92■□□□□ 0.62
PDZD4-201ENST00000164640 KIF14Q15058 1648 aa18.92■□□□□ 0.62
PDZD4-201ENST00000164640 DNTTIP2Q5QJE6 756 aaKnown RBP18.92■□□□□ 0.62
PDZD4-201ENST00000164640 NKTRP30414 1462 aaKnown RBP18.91■□□□□ 0.62
PDZD4-201ENST00000164640 ZMYM4Q5VZL5 1548 aa18.91■□□□□ 0.62
PDZD4-201ENST00000164640 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
PDZD4-201ENST00000164640 CUL7Q14999 1698 aa18.91■□□□□ 0.62
PDZD4-201ENST00000164640 TESK2Q96S53 571 aa18.91■□□□□ 0.62
PDZD4-201ENST00000164640 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
PDZD4-201ENST00000164640 TPRNQ4KMQ1 711 aa18.9■□□□□ 0.62
PDZD4-201ENST00000164640 TNPO1Q92973 898 aaKnown RBP18.89■□□□□ 0.62
PDZD4-201ENST00000164640 RLBP1P12271 317 aa18.89■□□□□ 0.61
PDZD4-201ENST00000164640 MBD5Q9P267 1494 aa18.88■□□□□ 0.61
PDZD4-201ENST00000164640 LRRIQ1Q96JM4 1722 aa18.88■□□□□ 0.61
PDZD4-201ENST00000164640 PTMAP06454 111 aaKnown RBP18.88■□□□□ 0.61
PDZD4-201ENST00000164640 GAS2L3Q86XJ1 694 aa18.88■□□□□ 0.61
PDZD4-201ENST00000164640 POLR1AO95602 1720 aaPredicted RBP18.87■□□□□ 0.61
PDZD4-201ENST00000164640 CC2D2AQ9P2K1 1620 aa18.87■□□□□ 0.61
PDZD4-201ENST00000164640 SMC4Q9NTJ3 1288 aa18.87■□□□□ 0.61
PDZD4-201ENST00000164640 WWC1Q8IX03 1113 aa18.87■□□□□ 0.61
PDZD4-201ENST00000164640 LNPKQ9C0E8 428 aa18.87■□□□□ 0.61
PDZD4-201ENST00000164640 ARHGEF11O15085 1522 aa18.87■□□□□ 0.61
PDZD4-201ENST00000164640 CAMSAP2Q08AD1 1489 aa18.86■□□□□ 0.61
PDZD4-201ENST00000164640 KIAA0586Q9BVV6 1533 aa18.86■□□□□ 0.61
PDZD4-201ENST00000164640 UHRF1BP1Q6BDS2 1440 aa18.86■□□□□ 0.61
PDZD4-201ENST00000164640 DNMBPQ6XZF7 1577 aa18.86■□□□□ 0.61
PDZD4-201ENST00000164640 PLEKHG5O94827 1062 aa18.86■□□□□ 0.61
PDZD4-201ENST00000164640 PRDM10Q9NQV6 1147 aa18.86■□□□□ 0.61
PDZD4-201ENST00000164640 MORC1Q86VD1 984 aa18.85■□□□□ 0.61
PDZD4-201ENST00000164640 SKOR2Q2VWA4 1001 aaPredicted RBP18.85■□□□□ 0.61
PDZD4-201ENST00000164640 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.84■□□□□ 0.61
PDZD4-201ENST00000164640 RARSP54136 660 aaKnown RBP18.84■□□□□ 0.61
PDZD4-201ENST00000164640 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
PDZD4-201ENST00000164640 CALD1Q05682 793 aaKnown RBP18.83■□□□□ 0.61
PDZD4-201ENST00000164640 ZSCAN30Q86W11 494 aa18.83■□□□□ 0.61
PDZD4-201ENST00000164640 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.6
PDZD4-201ENST00000164640 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
PDZD4-201ENST00000164640 CCDC173Q0VFZ6 552 aa18.82■□□□□ 0.6
PDZD4-201ENST00000164640 FOXD4L5Q5VV16 416 aaPredicted RBP18.82■□□□□ 0.6
PDZD4-201ENST00000164640 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
PDZD4-201ENST00000164640 FOXD4L4Q8WXT5 416 aaPredicted RBP18.82■□□□□ 0.6
PDZD4-201ENST00000164640 ZKSCAN2Q63HK3 967 aa18.82■□□□□ 0.6
PDZD4-201ENST00000164640 DZIP1LQ8IYY4 767 aaKnown RBP18.82■□□□□ 0.6
PDZD4-201ENST00000164640 SAMD9Q5K651 1589 aa18.82■□□□□ 0.6
PDZD4-201ENST00000164640 ZNF521Q96K83 1311 aa18.81■□□□□ 0.6
PDZD4-201ENST00000164640 MCTP1Q6DN14 999 aa18.81■□□□□ 0.6
PDZD4-201ENST00000164640 CAVIN1Q6NZI2 390 aaKnown RBP18.81■□□□□ 0.6
PDZD4-201ENST00000164640 U2AF1L5P0DN76 240 aaPredicted RBP18.81■□□□□ 0.6
PDZD4-201ENST00000164640 U2AF1Q01081 240 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDZD4-201ENST00000164640 CHGAP10645 457 aaKnown RBP18.8■□□□□ 0.6
PDZD4-201ENST00000164640 U2SURPO15042 1029 aaKnown RBP18.8■□□□□ 0.6
PDZD4-201ENST00000164640 DNMT1P26358 1616 aaKnown RBP18.8■□□□□ 0.6
PDZD4-201ENST00000164640 C9orf84Q5VXU9 1444 aa18.79■□□□□ 0.6
PDZD4-201ENST00000164640 UQCRHLA0A096LP55 91 aa18.79■□□□□ 0.6
PDZD4-201ENST00000164640 UQCRHP07919 91 aa18.79■□□□□ 0.6
PDZD4-201ENST00000164640 ISY1Q9ULR0 285 aaKnown RBP18.79■□□□□ 0.6
PDZD4-201ENST00000164640 SSFA2P28290 1259 aa18.78■□□□□ 0.6
PDZD4-201ENST00000164640 MPNDQ8N594 471 aa18.78■□□□□ 0.6
PDZD4-201ENST00000164640 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
PDZD4-201ENST00000164640 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
PDZD4-201ENST00000164640 ZHX1Q9UKY1 873 aaPredicted RBP18.78■□□□□ 0.6
PDZD4-201ENST00000164640 PRAG1Q86YV5 1406 aa18.77■□□□□ 0.6
PDZD4-201ENST00000164640 MVPQ14764 893 aaKnown RBP18.77■□□□□ 0.59
PDZD4-201ENST00000164640 ANKRD45Q5TZF3 282 aa18.76■□□□□ 0.59
PDZD4-201ENST00000164640 RNF214Q8ND24 703 aa18.76■□□□□ 0.59
PDZD4-201ENST00000164640 CFAP53Q96M91 514 aa18.76■□□□□ 0.59
PDZD4-201ENST00000164640 PTMSP20962 102 aa18.74■□□□□ 0.59
PDZD4-201ENST00000164640 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
PDZD4-201ENST00000164640 TROQ12816 1431 aaPredicted RBP18.74■□□□□ 0.59
PDZD4-201ENST00000164640 PLCB2Q00722 1185 aa18.73■□□□□ 0.59
PDZD4-201ENST00000164640 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
PDZD4-201ENST00000164640 COL17A1Q9UMD9 1497 aaPredicted RBP18.73■□□□□ 0.59
PDZD4-201ENST00000164640 TRMT2AQ8IZ69 625 aaKnown RBP18.73■□□□□ 0.59
PDZD4-201ENST00000164640 FOXD4L6Q3SYB3 417 aaPredicted RBP18.72■□□□□ 0.59
PDZD4-201ENST00000164640 FOXD4L3Q6VB84 417 aaPredicted RBP18.72■□□□□ 0.59
PDZD4-201ENST00000164640 OFD1O75665 1012 aa18.71■□□□□ 0.59
PDZD4-201ENST00000164640 APBB1O00213 710 aa18.71■□□□□ 0.59
PDZD4-201ENST00000164640 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
PDZD4-201ENST00000164640 IQGAP2Q13576 1575 aa18.7■□□□□ 0.58
PDZD4-201ENST00000164640 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
PDZD4-201ENST00000164640 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
PDZD4-201ENST00000164640 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
PDZD4-201ENST00000164640 EXOSC9Q06265 439 aaKnown RBP18.69■□□□□ 0.58
PDZD4-201ENST00000164640 K7ELQ4 463 aaPredicted RBP18.69■□□□□ 0.58
PDZD4-201ENST00000164640 PRPF40AO75400 957 aaKnown RBP18.69■□□□□ 0.58
PDZD4-201ENST00000164640 C1orf115Q9H7X2 142 aa18.68■□□□□ 0.58
PDZD4-201ENST00000164640 MAP7D2Q96T17 732 aa18.68■□□□□ 0.58
PDZD4-201ENST00000164640 INSRP06213 1382 aa18.68■□□□□ 0.58
PDZD4-201ENST00000164640 AAMPQ13685 434 aa18.67■□□□□ 0.58
PDZD4-201ENST00000164640 WDR62O43379 1518 aa18.67■□□□□ 0.58
PDZD4-201ENST00000164640 MTHFSP49914 203 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms