RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 SLC12A5Q9H2X9 1139 aa14.35□□□□□ -0.11
PKP2-201ENST00000070846 XPCQ01831 940 aaPredicted RBP14.34□□□□□ -0.11
PKP2-201ENST00000070846 HSP90AB1P08238 724 aaKnown RBP14.34□□□□□ -0.11
PKP2-201ENST00000070846 NEXNQ0ZGT2 675 aa14.34□□□□□ -0.11
PKP2-201ENST00000070846 MAGI1Q96QZ7 1491 aaPredicted RBP14.34□□□□□ -0.11
PKP2-201ENST00000070846 MCCP23508 829 aa14.33□□□□□ -0.11
PKP2-201ENST00000070846 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.11
PKP2-201ENST00000070846 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.12
PKP2-201ENST00000070846 CABP1Q9NZU7 370 aa14.33□□□□□ -0.12
PKP2-201ENST00000070846 TRIM6-TRIM34B2RNG4 842 aa14.33□□□□□ -0.12
PKP2-201ENST00000070846 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
PKP2-201ENST00000070846 MIA2Q96PC5 1412 aa14.32□□□□□ -0.12
PKP2-201ENST00000070846 ARHGEF11O15085 1522 aa14.32□□□□□ -0.12
PKP2-201ENST00000070846 FBXO31Q5XUX0 539 aaPredicted RBP14.32□□□□□ -0.12
PKP2-201ENST00000070846 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
PKP2-201ENST00000070846 MTHFSP49914 203 aa14.32□□□□□ -0.12
PKP2-201ENST00000070846 PRDM11Q9NQV5 511 aa14.32□□□□□ -0.12
PKP2-201ENST00000070846 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
PKP2-201ENST00000070846 KIF7Q2M1P5 1343 aa14.3□□□□□ -0.12
PKP2-201ENST00000070846 CDK19Q9BWU1 502 aa14.3□□□□□ -0.12
PKP2-201ENST00000070846 C9orf78Q9NZ63 289 aaPredicted RBP14.3□□□□□ -0.12
PKP2-201ENST00000070846 EPRSP07814 1512 aaKnown RBP14.3□□□□□ -0.12
PKP2-201ENST00000070846 HFM1A2PYH4 1435 aa14.3□□□□□ -0.12
PKP2-201ENST00000070846 GPATCH3Q96I76 525 aa14.29□□□□□ -0.12
PKP2-201ENST00000070846 IQGAP2Q13576 1575 aa14.28□□□□□ -0.12
PKP2-201ENST00000070846 TSPYL4Q9UJ04 414 aa14.28□□□□□ -0.12
PKP2-201ENST00000070846 FKBP5Q13451 457 aaPredicted RBP14.28□□□□□ -0.12
PKP2-201ENST00000070846 TOM1L2Q6ZVM7 507 aa14.28□□□□□ -0.12
PKP2-201ENST00000070846 TOMM22Q9NS69 142 aa14.28□□□□□ -0.12
PKP2-201ENST00000070846 GOLGA6L4A6NEF3 574 aa14.27□□□□□ -0.13
PKP2-201ENST00000070846 E9PSI1 815 aa14.27□□□□□ -0.13
PKP2-201ENST00000070846 ZC3H6P61129 1189 aaKnown RBP14.27□□□□□ -0.13
PKP2-201ENST00000070846 IDI1Q13907 227 aa14.26□□□□□ -0.13
PKP2-201ENST00000070846 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
PKP2-201ENST00000070846 DDX54Q8TDD1 881 aaKnown RBP14.26□□□□□ -0.13
PKP2-201ENST00000070846 ADGRL1O94910 1474 aa14.26□□□□□ -0.13
PKP2-201ENST00000070846 SPRYD3Q8NCJ5 442 aa14.26□□□□□ -0.13
PKP2-201ENST00000070846 DDX58O95786 925 aaKnown RBP14.25□□□□□ -0.13
PKP2-201ENST00000070846 CFAP44Q96MT7 982 aa14.25□□□□□ -0.13
PKP2-201ENST00000070846 PLIN1O60240 522 aa14.25□□□□□ -0.13
PKP2-201ENST00000070846 PLCB2Q00722 1185 aa14.25□□□□□ -0.13
PKP2-201ENST00000070846 HSCBQ8IWL3 235 aa14.25□□□□□ -0.13
PKP2-201ENST00000070846 EHBP1L1Q8N3D4 1523 aa14.25□□□□□ -0.13
PKP2-201ENST00000070846 WAPLQ7Z5K2 1190 aa14.24□□□□□ -0.13
PKP2-201ENST00000070846 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
PKP2-201ENST00000070846 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.24□□□□□ -0.13
PKP2-201ENST00000070846 GNL2Q13823 731 aaKnown RBP14.24□□□□□ -0.13
PKP2-201ENST00000070846 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
PKP2-201ENST00000070846 ZKSCAN2Q63HK3 967 aa14.24□□□□□ -0.13
PKP2-201ENST00000070846 KIAA1107Q9UPP5 1409 aa14.24□□□□□ -0.13
PKP2-201ENST00000070846 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
PKP2-201ENST00000070846 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
PKP2-201ENST00000070846 FOXO3O43524 673 aa14.23□□□□□ -0.13
PKP2-201ENST00000070846 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
PKP2-201ENST00000070846 ERBINQ96RT1 1412 aa14.23□□□□□ -0.13
PKP2-201ENST00000070846 CCDC7Q96M83 1385 aa14.23□□□□□ -0.13
PKP2-201ENST00000070846 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
PKP2-201ENST00000070846 COG6Q9Y2V7 657 aa14.23□□□□□ -0.13
PKP2-201ENST00000070846 DAPK1P53355 1430 aa14.22□□□□□ -0.13
PKP2-201ENST00000070846 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
PKP2-201ENST00000070846 FAM177BA6PVY3 158 aa14.22□□□□□ -0.13
PKP2-201ENST00000070846 RTEL1-TNFRSF6BF6WH68 1400 aa14.22□□□□□ -0.13
PKP2-201ENST00000070846 HECW1Q76N89 1606 aa14.22□□□□□ -0.13
PKP2-201ENST00000070846 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
PKP2-201ENST00000070846 TATP17735 454 aaPredicted RBP14.21□□□□□ -0.13
PKP2-201ENST00000070846 PRKAR2BP31323 418 aa14.21□□□□□ -0.13
PKP2-201ENST00000070846 GNAI1P63096 354 aa14.21□□□□□ -0.13
PKP2-201ENST00000070846 PLEKHO1Q53GL0 409 aaPredicted RBP14.21□□□□□ -0.14
PKP2-201ENST00000070846 SULT6B1Q6IMI4 303 aa14.2□□□□□ -0.14
PKP2-201ENST00000070846 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
PKP2-201ENST00000070846 PPP1R1BQ9UD71 204 aaPredicted RBP14.2□□□□□ -0.14
PKP2-201ENST00000070846 RIC3Q7Z5B4 369 aa14.2□□□□□ -0.14
PKP2-201ENST00000070846 AMOTL2Q9Y2J4 779 aa14.2□□□□□ -0.14
PKP2-201ENST00000070846 DENND4BO75064 1496 aaPredicted RBP14.19□□□□□ -0.14
PKP2-201ENST00000070846 CCDC141Q6ZP82 1450 aa14.19□□□□□ -0.14
PKP2-201ENST00000070846 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
PKP2-201ENST00000070846 ADAMTS2O95450 1211 aa14.19□□□□□ -0.14
PKP2-201ENST00000070846 VPS37DQ86XT2 251 aa14.19□□□□□ -0.14
PKP2-201ENST00000070846 MFAP1P55081 439 aaKnown RBP14.18□□□□□ -0.14
PKP2-201ENST00000070846 ANKRD45Q5TZF3 282 aa14.18□□□□□ -0.14
PKP2-201ENST00000070846 TCP11L2Q8N4U5 519 aa14.18□□□□□ -0.14
PKP2-201ENST00000070846 GAS2L2Q8NHY3 880 aa14.18□□□□□ -0.14
PKP2-201ENST00000070846 RILPL2Q969X0 211 aa14.18□□□□□ -0.14
PKP2-201ENST00000070846 API5Q9BZZ5 524 aaKnown RBP14.18□□□□□ -0.14
PKP2-201ENST00000070846 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
PKP2-201ENST00000070846 CLSTN1O94985 981 aa14.17□□□□□ -0.14
PKP2-201ENST00000070846 PTMAP06454 111 aaKnown RBP14.17□□□□□ -0.14
PKP2-201ENST00000070846 PPP6R1Q9UPN7 881 aa14.17□□□□□ -0.14
PKP2-201ENST00000070846 WASHC2AQ641Q2 1341 aa14.17□□□□□ -0.14
PKP2-201ENST00000070846 ZNF530Q6P9A1 599 aaPredicted RBP14.17□□□□□ -0.14
PKP2-201ENST00000070846 RRS1Q15050 365 aaKnown RBP14.17□□□□□ -0.14
PKP2-201ENST00000070846 FBXW7Q969H0 707 aa14.17□□□□□ -0.14
PKP2-201ENST00000070846 FANCAO15360 1455 aa14.16□□□□□ -0.14
PKP2-201ENST00000070846 NOL8Q76FK4 1167 aaKnown RBP14.15□□□□□ -0.14
PKP2-201ENST00000070846 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
PKP2-201ENST00000070846 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
PKP2-201ENST00000070846 TIAM1Q13009 1591 aa14.14□□□□□ -0.15
PKP2-201ENST00000070846 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
PKP2-201ENST00000070846 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
PKP2-201ENST00000070846 DZIP1LQ8IYY4 767 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms