RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
CTNS-201ENST00000046640 PLIN1O60240 522 aa17.46■□□□□ 0.38
CTNS-201ENST00000046640 PPP2R1AP30153 589 aa17.46■□□□□ 0.38
CTNS-201ENST00000046640 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.38
CTNS-201ENST00000046640 TMEM132EQ6IEE7 984 aa17.46■□□□□ 0.38
CTNS-201ENST00000046640 TRAK1Q9UPV9 953 aa17.46■□□□□ 0.38
CTNS-201ENST00000046640 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
CTNS-201ENST00000046640 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
CTNS-201ENST00000046640 RNF123Q5XPI4 1314 aa17.44■□□□□ 0.38
CTNS-201ENST00000046640 LAMC1P11047 1609 aa17.44■□□□□ 0.38
CTNS-201ENST00000046640 TET3O43151 1660 aa17.44■□□□□ 0.38
CTNS-201ENST00000046640 EXOC6Q8TAG9 804 aa17.44■□□□□ 0.38
CTNS-201ENST00000046640 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
CTNS-201ENST00000046640 DEPDC5O75140 1603 aa17.43■□□□□ 0.38
CTNS-201ENST00000046640 RRP1P56182 461 aaKnown RBP17.42■□□□□ 0.38
CTNS-201ENST00000046640 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
CTNS-201ENST00000046640 CCDC146Q8IYE0 955 aa17.42■□□□□ 0.38
CTNS-201ENST00000046640 CEP152O94986 1710 aa17.42■□□□□ 0.38
CTNS-201ENST00000046640 RNF17Q9BXT8 1623 aaKnown RBP17.42■□□□□ 0.38
CTNS-201ENST00000046640 KIDINS220Q9ULH0 1771 aa17.41■□□□□ 0.38
CTNS-201ENST00000046640 ZNF518AQ6AHZ1 1483 aa17.41■□□□□ 0.38
CTNS-201ENST00000046640 MROH1Q8NDA8 1641 aa17.41■□□□□ 0.38
CTNS-201ENST00000046640 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
CTNS-201ENST00000046640 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
CTNS-201ENST00000046640 NOS1P29475 1434 aa17.4■□□□□ 0.38
CTNS-201ENST00000046640 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
CTNS-201ENST00000046640 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
CTNS-201ENST00000046640 VWDEQ8N2E2 1590 aa17.39■□□□□ 0.37
CTNS-201ENST00000046640 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
CTNS-201ENST00000046640 CARD14Q9BXL6 1004 aa17.38■□□□□ 0.37
CTNS-201ENST00000046640 SAFB2Q14151 953 aaKnown RBP eCLIP17.38■□□□□ 0.37
CTNS-201ENST00000046640 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
CTNS-201ENST00000046640 PPRC1Q5VV67 1664 aaKnown RBP17.36■□□□□ 0.37
CTNS-201ENST00000046640 NPATQ14207 1427 aa17.36■□□□□ 0.37
CTNS-201ENST00000046640 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
CTNS-201ENST00000046640 ZBTB47Q9UFB7 747 aaPredicted RBP17.35■□□□□ 0.37
CTNS-201ENST00000046640 EFCAB6Q5THR3 1501 aa17.35■□□□□ 0.37
CTNS-201ENST00000046640 POGZQ7Z3K3 1410 aa17.35■□□□□ 0.37
CTNS-201ENST00000046640 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
CTNS-201ENST00000046640 SKAP1Q86WV1 359 aa17.34■□□□□ 0.37
CTNS-201ENST00000046640 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.36
CTNS-201ENST00000046640 CENPJQ9HC77 1338 aaPredicted RBP17.33■□□□□ 0.36
CTNS-201ENST00000046640 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
CTNS-201ENST00000046640 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
CTNS-201ENST00000046640 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
CTNS-201ENST00000046640 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
CTNS-201ENST00000046640 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
CTNS-201ENST00000046640 MAP3K4Q9Y6R4 1608 aa17.31■□□□□ 0.36
CTNS-201ENST00000046640 STK26Q9P289 416 aa17.31■□□□□ 0.36
CTNS-201ENST00000046640 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
CTNS-201ENST00000046640 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
CTNS-201ENST00000046640 KIF1BO60333 1816 aa17.3■□□□□ 0.36
CTNS-201ENST00000046640 APAF1O14727 1248 aa17.3■□□□□ 0.36
CTNS-201ENST00000046640 FRMPD1Q5SYB0 1578 aa17.29■□□□□ 0.36
CTNS-201ENST00000046640 CRBNQ96SW2 442 aa17.29■□□□□ 0.36
CTNS-201ENST00000046640 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
CTNS-201ENST00000046640 IDI1Q13907 227 aa17.28■□□□□ 0.36
CTNS-201ENST00000046640 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
CTNS-201ENST00000046640 MYOM2P54296 1465 aa17.27■□□□□ 0.36
CTNS-201ENST00000046640 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
CTNS-201ENST00000046640 SYNMO15061 1565 aa17.27■□□□□ 0.36
CTNS-201ENST00000046640 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
CTNS-201ENST00000046640 NEUROD2Q15784 382 aa17.27■□□□□ 0.36
CTNS-201ENST00000046640 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
CTNS-201ENST00000046640 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
CTNS-201ENST00000046640 YEATS2Q9ULM3 1422 aa17.25■□□□□ 0.35
CTNS-201ENST00000046640 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
CTNS-201ENST00000046640 MORC1Q86VD1 984 aa17.25■□□□□ 0.35
CTNS-201ENST00000046640 HECW2Q9P2P5 1572 aa17.25■□□□□ 0.35
CTNS-201ENST00000046640 MYOM1P52179 1685 aa17.25■□□□□ 0.35
CTNS-201ENST00000046640 FBXO31Q5XUX0 539 aaPredicted RBP17.24■□□□□ 0.35
CTNS-201ENST00000046640 CABP2Q9NPB3 220 aa17.24■□□□□ 0.35
CTNS-201ENST00000046640 KDM5AP29375 1690 aaKnown RBP17.24■□□□□ 0.35
CTNS-201ENST00000046640 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
CTNS-201ENST00000046640 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
CTNS-201ENST00000046640 ZMYM4Q5VZL5 1548 aa17.23■□□□□ 0.35
CTNS-201ENST00000046640 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
CTNS-201ENST00000046640 ADGRB3O60242 1522 aa17.22■□□□□ 0.35
CTNS-201ENST00000046640 LMTK2Q8IWU2 1503 aa17.22■□□□□ 0.35
CTNS-201ENST00000046640 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
CTNS-201ENST00000046640 ABCC3O15438 1527 aa17.22■□□□□ 0.35
CTNS-201ENST00000046640 PIK3C2GO75747 1445 aa17.22■□□□□ 0.35
CTNS-201ENST00000046640 PDE4AP27815 886 aa17.22■□□□□ 0.35
CTNS-201ENST00000046640 VGFO15240 615 aaPredicted RBP17.21■□□□□ 0.35
CTNS-201ENST00000046640 MLECQ14165 292 aa17.21■□□□□ 0.35
CTNS-201ENST00000046640 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
CTNS-201ENST00000046640 NRXN1Q9ULB1 1477 aa17.2■□□□□ 0.34
CTNS-201ENST00000046640 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
CTNS-201ENST00000046640 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
CTNS-201ENST00000046640 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
CTNS-201ENST00000046640 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
CTNS-201ENST00000046640 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
CTNS-201ENST00000046640 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
CTNS-201ENST00000046640 RPGRIP1LQ68CZ1 1315 aa17.17■□□□□ 0.34
CTNS-201ENST00000046640 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
CTNS-201ENST00000046640 CFAP74Q9C0B2 1584 aa17.17■□□□□ 0.34
CTNS-201ENST00000046640 BCAR3O75815 825 aa17.17■□□□□ 0.34
CTNS-201ENST00000046640 MTHFSP49914 203 aa17.17■□□□□ 0.34
CTNS-201ENST00000046640 MINK1Q8N4C8 1332 aaPredicted RBP17.16■□□□□ 0.34
CTNS-201ENST00000046640 SIGLEC1Q9BZZ2 1709 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms