RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 HIRIP3Q9BW71 556 aaPredicted RBP31.07■■■□□ 2.56
HOXC8-201ENST00000040584 TRPM1Q7Z4N2 1603 aa31.07■■■□□ 2.56
HOXC8-201ENST00000040584 NUTM2DQ5VT03 806 aaPredicted RBP31.06■■■□□ 2.56
HOXC8-201ENST00000040584 A2ML1A8K2U0 1454 aa31.05■■■□□ 2.56
HOXC8-201ENST00000040584 NEXMIFQ5QGS0 1516 aa31.05■■■□□ 2.56
HOXC8-201ENST00000040584 NBPF1Q3BBV0 1214 aa31.04■■■□□ 2.56
HOXC8-201ENST00000040584 ROCK2O75116 1388 aaKnown RBP31.04■■■□□ 2.56
HOXC8-201ENST00000040584 CARD11Q9BXL7 1154 aa31.02■■■□□ 2.56
HOXC8-201ENST00000040584 EIF4G2P78344 907 aaKnown RBP eCLIP31.01■■■□□ 2.56
HOXC8-201ENST00000040584 HSPA5P11021 654 aaKnown RBP31.01■■■□□ 2.55
HOXC8-201ENST00000040584 NLRP1Q9C000 1473 aa31.01■■■□□ 2.55
HOXC8-201ENST00000040584 NRXN1Q9ULB1 1477 aa31.01■■■□□ 2.55
HOXC8-201ENST00000040584 VGFO15240 615 aaPredicted RBP30.99■■■□□ 2.55
HOXC8-201ENST00000040584 PELP1Q8IZL8 1130 aaKnown RBP30.96■■■□□ 2.55
HOXC8-201ENST00000040584 CFAP70Q5T0N1 1121 aa30.95■■■□□ 2.55
HOXC8-201ENST00000040584 UBR1Q8IWV7 1749 aa30.95■■■□□ 2.55
HOXC8-201ENST00000040584 GPRASP1Q5JY77 1395 aa30.95■■■□□ 2.54
HOXC8-201ENST00000040584 MIER1Q8N108 512 aa30.95■■■□□ 2.54
HOXC8-201ENST00000040584 USP47Q96K76 1375 aa30.94■■■□□ 2.54
HOXC8-201ENST00000040584 PIK3C2GO75747 1445 aa30.94■■■□□ 2.54
HOXC8-201ENST00000040584 ZFYVE9O95405 1425 aa30.93■■■□□ 2.54
HOXC8-201ENST00000040584 RIMS2Q9UQ26 1411 aa30.93■■■□□ 2.54
HOXC8-201ENST00000040584 PTPRMP28827 1452 aa30.93■■■□□ 2.54
HOXC8-201ENST00000040584 KDM5AP29375 1690 aaKnown RBP30.93■■■□□ 2.54
HOXC8-201ENST00000040584 MYO3AQ8NEV4 1616 aa30.91■■■□□ 2.54
HOXC8-201ENST00000040584 SENP3Q9H4L4 574 aaPredicted RBP30.9■■■□□ 2.54
HOXC8-201ENST00000040584 KIAA1210Q9ULL0 1709 aa30.9■■■□□ 2.54
HOXC8-201ENST00000040584 C14orf93Q9H972 538 aaKnown RBP30.88■■■□□ 2.53
HOXC8-201ENST00000040584 LAMC1P11047 1609 aa30.88■■■□□ 2.53
HOXC8-201ENST00000040584 TMEM2Q9UHN6 1383 aa30.87■■■□□ 2.53
HOXC8-201ENST00000040584 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.84■■■□□ 2.53
HOXC8-201ENST00000040584 HDGFP51858 240 aaKnown RBP30.82■■■□□ 2.52
HOXC8-201ENST00000040584 CEP170BQ9Y4F5 1589 aaPredicted RBP30.82■■■□□ 2.52
HOXC8-201ENST00000040584 ST20-MTHFSA0A0A6YYL1 179 aa30.81■■■□□ 2.52
HOXC8-201ENST00000040584 THEMISQ8N1K5 641 aaPredicted RBP30.81■■■□□ 2.52
HOXC8-201ENST00000040584 GTF3C3Q9Y5Q9 886 aa30.81■■■□□ 2.52
HOXC8-201ENST00000040584 SETD1BQ9UPS6 1966 aaKnown RBP30.81■■■□□ 2.52
HOXC8-201ENST00000040584 KDM4FA0A1W2PPD8 638 aa30.8■■■□□ 2.52
HOXC8-201ENST00000040584 TMEM132EQ6IEE7 984 aa30.78■■■□□ 2.52
HOXC8-201ENST00000040584 LTKP29376 864 aa30.77■■■□□ 2.52
HOXC8-201ENST00000040584 SETBP1Q9Y6X0 1596 aa30.77■■■□□ 2.52
HOXC8-201ENST00000040584 SCAF11Q99590 1463 aaKnown RBP30.76■■■□□ 2.51
HOXC8-201ENST00000040584 IQGAP1P46940 1657 aa30.75■■■□□ 2.51
HOXC8-201ENST00000040584 ADGRB1O14514 1584 aa30.75■■■□□ 2.51
HOXC8-201ENST00000040584 TXNDC2Q86VQ3 553 aa30.75■■■□□ 2.51
HOXC8-201ENST00000040584 SLIT1O75093 1534 aa30.75■■■□□ 2.51
HOXC8-201ENST00000040584 ARHGAP23Q9P227 1491 aa30.74■■■□□ 2.51
HOXC8-201ENST00000040584 C11orf95C9JLR9 678 aaPredicted RBP30.74■■■□□ 2.51
HOXC8-201ENST00000040584 ZNF142P52746 1687 aaPredicted RBP30.73■■■□□ 2.51
HOXC8-201ENST00000040584 EID1Q9Y6B2 187 aa30.73■■■□□ 2.51
HOXC8-201ENST00000040584 ALKQ9UM73 1620 aa30.72■■■□□ 2.51
HOXC8-201ENST00000040584 WASHC2AQ641Q2 1341 aa30.69■■■□□ 2.5
HOXC8-201ENST00000040584 BCANQ96GW7 911 aa30.69■■■□□ 2.5
HOXC8-201ENST00000040584 NRXN3Q9Y4C0 1643 aa30.68■■■□□ 2.5
HOXC8-201ENST00000040584 ASXL1Q8IXJ9 1541 aa30.68■■■□□ 2.5
HOXC8-201ENST00000040584 TRAK1Q9UPV9 953 aa30.67■■■□□ 2.5
HOXC8-201ENST00000040584 PLEKHG1Q9ULL1 1385 aa30.66■■■□□ 2.5
HOXC8-201ENST00000040584 EIF3AQ14152 1382 aaKnown RBP30.65■■■□□ 2.5
HOXC8-201ENST00000040584 TESK2Q96S53 571 aa30.64■■■□□ 2.5
HOXC8-201ENST00000040584 DDX10Q13206 875 aaKnown RBP30.63■■■□□ 2.49
HOXC8-201ENST00000040584 YTHDC1Q96MU7 727 aaKnown RBP30.63■■■□□ 2.49
HOXC8-201ENST00000040584 CCDC7Q96M83 1385 aa30.63■■■□□ 2.49
HOXC8-201ENST00000040584 KIF7Q2M1P5 1343 aa30.62■■■□□ 2.49
HOXC8-201ENST00000040584 STK26Q9P289 416 aa30.62■■■□□ 2.49
HOXC8-201ENST00000040584 SETD1AO15047 1707 aaKnown RBP30.62■■■□□ 2.49
HOXC8-201ENST00000040584 POLR1AO95602 1720 aaPredicted RBP30.61■■■□□ 2.49
HOXC8-201ENST00000040584 ADAMTS13Q76LX8 1427 aa30.59■■■□□ 2.49
HOXC8-201ENST00000040584 YTHDC2Q9H6S0 1430 aaKnown RBP30.59■■■□□ 2.49
HOXC8-201ENST00000040584 ANKLE2Q86XL3 938 aa30.58■■■□□ 2.49
HOXC8-201ENST00000040584 METP08581 1390 aa30.58■■■□□ 2.49
HOXC8-201ENST00000040584 SLC26A8Q96RN1 970 aa30.56■■■□□ 2.48
HOXC8-201ENST00000040584 POLR3GLQ9BT43 218 aa30.56■■■□□ 2.48
HOXC8-201ENST00000040584 CENPJQ9HC77 1338 aaPredicted RBP30.54■■■□□ 2.48
HOXC8-201ENST00000040584 DISP3Q9P2K9 1392 aa30.52■■■□□ 2.48
HOXC8-201ENST00000040584 ARHGEF28Q8N1W1 1705 aaKnown RBP30.52■■■□□ 2.48
HOXC8-201ENST00000040584 MED14O60244 1454 aa30.52■■■□□ 2.48
HOXC8-201ENST00000040584 TMF1P82094 1093 aa30.52■■■□□ 2.48
HOXC8-201ENST00000040584 LRPPRCP42704 1394 aaKnown RBP30.51■■■□□ 2.48
HOXC8-201ENST00000040584 TBX22Q9Y458 520 aa30.48■■■□□ 2.47
HOXC8-201ENST00000040584 SAFB2Q14151 953 aaKnown RBP eCLIP30.46■■■□□ 2.47
HOXC8-201ENST00000040584 ABCC11Q96J66 1382 aa30.46■■■□□ 2.47
HOXC8-201ENST00000040584 PRAM1Q96QH2 718 aa30.46■■■□□ 2.47
HOXC8-201ENST00000040584 QRICH2Q9H0J4 1663 aa30.46■■■□□ 2.47
HOXC8-201ENST00000040584 NCKAP5LQ9HCH0 1330 aa30.45■■■□□ 2.46
HOXC8-201ENST00000040584 SBNO2Q9Y2G9 1366 aa30.44■■■□□ 2.46
HOXC8-201ENST00000040584 POGKQ9P215 609 aa30.44■■■□□ 2.46
HOXC8-201ENST00000040584 DIP2AQ14689 1571 aa30.42■■■□□ 2.46
HOXC8-201ENST00000040584 SLC24A1O60721 1099 aa30.42■■■□□ 2.46
HOXC8-201ENST00000040584 DLC1Q96QB1 1528 aa30.42■■■□□ 2.46
HOXC8-201ENST00000040584 HSPA2P54652 639 aa30.41■■■□□ 2.46
HOXC8-201ENST00000040584 WAPLQ7Z5K2 1190 aa30.4■■■□□ 2.46
HOXC8-201ENST00000040584 PTPRUQ92729 1446 aa30.4■■■□□ 2.46
HOXC8-201ENST00000040584 NPHP4O75161 1426 aaPredicted RBP30.39■■■□□ 2.46
HOXC8-201ENST00000040584 LMTK3Q96Q04 1460 aa30.38■■■□□ 2.45
HOXC8-201ENST00000040584 CDCA8Q53HL2 280 aa30.38■■■□□ 2.45
HOXC8-201ENST00000040584 PLEKHH1Q9ULM0 1364 aa30.37■■■□□ 2.45
HOXC8-201ENST00000040584 TECPR2O15040 1411 aa30.37■■■□□ 2.45
HOXC8-201ENST00000040584 KNDC1Q76NI1 1749 aa30.36■■■□□ 2.45
HOXC8-201ENST00000040584 AMOTL2Q9Y2J4 779 aa30.36■■■□□ 2.45
HOXC8-201ENST00000040584 MINK1Q8N4C8 1332 aaPredicted RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms