RNA–Protein interactions for RNA: ENSMUST00000149179.8

Col20a1-202, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 3,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-202ENSMUST00000149179 Ecm2Q5FW85 670 aa13.82□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Htatsf1Q8BGC0 757 aa13.82□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Tarbp1E9Q368 1579 aa13.82□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Tex14Q7M6U3 1450 aa13.82□□□□□ -0.2
Col20a1-202ENSMUST00000149179 AU015836B2RUM3 263 aa13.82□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Tnpo1Q8BFY9 898 aaKnown RBP13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Atxn3Q9CVD2 355 aa13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Ssh2Q5SW75 1423 aa13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Rlbp1Q9Z275 317 aa13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Shroom2A2ALU4 1481 aa13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Plch2A2AP18 1501 aa13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Kiaa1551Q5DTW7 1521 aa13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Fam163aQ8CAA5 168 aa13.81□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Taok2Q6ZQ29 1240 aa13.8□□□□□ -0.2
Col20a1-202ENSMUST00000149179 DroshaQ5HZJ0 1373 aaKnown RBP13.8□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Sall3Q62255 1320 aa13.8□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Fam135aQ6NS59 1506 aa13.8□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Trpm2Q91YD4 1506 aa13.8□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Gm20521D3Z5F7 333 aa13.79□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Pnmal2G3X9N3 661 aa13.79□□□□□ -0.2
Col20a1-202ENSMUST00000149179 AknaQ80VW7 1404 aa13.79□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Pdcl3Q8BVF2 240 aa13.78□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Iqgap1Q9JKF1 1657 aaKnown RBP13.78□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Mfap1aC0HKD8 439 aaKnown RBP13.77□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Mfap1bC0HKD9 439 aaKnown RBP13.77□□□□□ -0.2
Col20a1-202ENSMUST00000149179 PtprgQ05909 1442 aa13.77□□□□□ -0.2
Col20a1-202ENSMUST00000149179 Duxf3A0A0N4SV92 674 aa13.77□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Pdlim2Q8R1G6 349 aa13.76□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Vsig10D3YX43 558 aa13.75□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Gapvd1Q6PAR5 1458 aa13.75□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Stk24Q99KH8 431 aa13.75□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Ttc41Q692V3 1318 aa13.75□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Sptbn5F6UCX4 1208 aa13.75□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Mlh3A0A1Y7VMP7 1443 aa13.74□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Usp19Q3UJD6 1360 aa13.74□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Pde4cQ3UEI1 686 aa13.74□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Trappc8E9PWG2 1437 aa13.74□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Tubgcp6G5E8P0 1769 aa13.74□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Fan1Q69ZT1 1020 aa13.73□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Setd1bQ8CFT2 1985 aa13.73□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Plcb2A3KGF7 1181 aa13.73□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Mroh2aD3Z750 1679 aa13.73□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Ksr2Q3UVC0 959 aa13.73□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Spag9Q58A65 1321 aaKnown RBP13.73□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Gm16486A0A1D5RMD1 1434 aa13.72□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Trim58Q5NCC9 485 aa13.72□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Znf330Q922H9 316 aa13.72□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Mapkbp1Q6NS57 1503 aa13.72□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Ppp2r3aB2RXC8 1150 aa13.72□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Gtf2e1Q9D0D5 440 aa13.72□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Map3k5O35099 1380 aa13.71□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Eif4g3Q80XI3 1579 aaKnown RBP13.71□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Lrrc9Q8CDN9 1456 aa13.71□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Mrc2Q64449 1479 aa13.71□□□□□ -0.21
Col20a1-202ENSMUST00000149179 Apaf1O88879 1249 aa13.71□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Ppp1r3fQ9JIG4 799 aa13.71□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Abcc2Q8VI47 1543 aa13.7□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Jph4Q80WT0 628 aa13.7□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Ralbp1Q62172 648 aa13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 DekQ7TNV0 380 aaKnown RBP13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Usp40Q8BWR4 1235 aa13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Paxip1Q6NZQ4 1056 aa13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Setd1aE9PYH6 1716 aa13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Caskin1Q6P9K8 1431 aa13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Srpk2O54781 681 aaKnown RBP13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Gtf2a1Q99PM3 378 aa13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Arhgap5P97393 1501 aa13.69□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Rabep1O35551 862 aa13.68□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Uspl1Q3ULM6 1089 aa13.68□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Senp3Q9EP97 568 aaKnown RBP13.68□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Atf7ipQ7TT18 1306 aa13.68□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Catsper2A2ARP9 588 aa13.67□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Il4rP16382 810 aa13.67□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Rfx1P48377 963 aa13.67□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Ylpm1Q9R0I7 1386 aaKnown RBP13.67□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Ssh1Q76I79 1042 aa13.67□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Fmn2Q9JL04 1578 aa13.67□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Adamts13Q769J6 1426 aa13.66□□□□□ -0.22
Col20a1-202ENSMUST00000149179 SlkO54988 1233 aa13.66□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Kiaa1107Q80TK0 1369 aa13.66□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Nup160Q9Z0W3 1402 aaKnown RBP13.65□□□□□ -0.22
Col20a1-202ENSMUST00000149179 U2af1Q9D883 239 aaKnown RBP13.65□□□□□ -0.22
Col20a1-202ENSMUST00000149179 Tmc1Q8R4P5 757 aa13.64□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Sbno1Q689Z5 1390 aa13.64□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Neo1P97798 1493 aa13.64□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Mcm4P49717 862 aa13.64□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Rrbp1Q99PL5 1605 aaKnown RBP13.64□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Antxr1Q9CZ52 562 aa13.64□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Aplp1Q03157 653 aa13.63□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Nutm1Q8BHP2 1126 aa13.63□□□□□ -0.23
Col20a1-202ENSMUST00000149179 GsdmaQ9EST1 446 aa13.63□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Tbc1d32Q3URV1 1296 aa13.62□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Clasp1Q80TV8 1535 aaKnown RBP13.62□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Edc4Q3UJB9 1406 aaKnown RBP13.62□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Phf14Q9D4H9 881 aa13.62□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Adgrl2Q8JZZ7 1487 aa13.61□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Zmym3Q9JLM4 1370 aa13.61□□□□□ -0.23
Col20a1-202ENSMUST00000149179 AU019823E9PUQ3 292 aa13.61□□□□□ -0.23
Col20a1-202ENSMUST00000149179 Kif3bQ61771 747 aa13.6□□□□□ -0.23
Col20a1-202ENSMUST00000149179 GorabQ8BRM2 368 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 6 ms