RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Esx1O88933 382 aa13.48□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Cbx1P83917 185 aaKnown RBP13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 AcrbpQ3V140 540 aa13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Mphosph9A6H5Y1 991 aa13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Nectin2P32507 530 aa13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Erich4Q3UNU4 136 aa13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Ccdc47Q9D024 483 aaKnown RBP13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Tsen2Q6P7W5 460 aa13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Themis2Q91YX0 663 aa13.47□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Pdia4P08003 638 aaKnown RBP13.46□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Q8C5K5 320 aa13.46□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Tceal9Q9DD24 104 aa13.46□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Glipr1l2Q9CQ35 332 aa13.46□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Rock2P70336 1388 aa13.46□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 KinQ8K339 391 aa13.46□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 NacadQ5SWP3 1504 aa13.46□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Gtf2f1Q3THK3 508 aaKnown RBP13.45□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Trim55G3X8Y1 545 aa13.45□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Paf1Q8K2T8 535 aa13.45□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Pank1Q8K4K6 548 aa13.45□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Pank3Q8R2W9 370 aa13.45□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Bcl11bQ99PV8 884 aa13.45□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Kdm4aQ8BW72 1064 aa13.45□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Q9D2X8 372 aa13.44□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Smg6P61406 1418 aaKnown RBP13.44□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Hmox1P14901 289 aa13.44□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 HmmrQ00547 794 aaKnown RBP13.44□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Tnpo1Q8BFY9 898 aaKnown RBP13.44□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Kif3aP28741 701 aa13.43□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 G3bp1P97855 465 aaKnown RBP13.43□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 NefhP19246 1090 aa13.43□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Plcd3Q8K2J0 785 aa13.43□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Hmgn5Q9JL35 406 aa13.43□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Zfp777B9EKF4 885 aa13.43□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Q4VA45 678 aa13.43□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 March6Q6ZQ89 909 aa13.42□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Gpatch3Q8BIY1 525 aa13.42□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Neurod6P48986 337 aa13.42□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Ttll13A4Q9F6 804 aa13.42□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Cdkn1cP49919 348 aa13.42□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Cgnl1Q6AW69 1298 aa13.42□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Gtf2a1Q99PM3 378 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Inpp5dQ9ES52 1191 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Cabp1Q9JLK7 227 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Nek4Q9Z1J2 792 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Odf2A3KGV1 830 aaKnown RBP13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Ccp110Q7TSH4 1004 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Chaf1aQ9QWF0 911 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Ccdc183A2AJB1 534 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 EzrP26040 586 aaKnown RBP13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Olfml1Q8BSH2 233 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Tmc1Q8R4P5 757 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Tex19.1Q99MV2 351 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Stk3Q9JI10 497 aa13.41□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Srcin1Q9QWI6 1250 aa13.4□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Rsf1E9PWW9 1441 aaKnown RBP13.4□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Tmco3Q8BH01 678 aa13.4□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 NaspQ99MD9 773 aaKnown RBP13.4□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 CastP51125 788 aa13.4□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Srek1Q8BZX4 494 aaKnown RBP13.4□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Dctn1O08788 1281 aa13.4□□□□□ -0.26
Gtf3c1-201ENSMUST00000055506 Ccdc173A0JLY1 547 aa13.4□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Vgll3P85442 326 aa13.4□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Gps2Q921N8 327 aa13.39□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Ripply1Q2WG77 201 aa13.38□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 CenphQ9QYM8 241 aa13.38□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Arid3cA6PWV5 409 aa13.38□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 ItpripQ3TNL8 555 aa13.38□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Pde1cQ64338 706 aa13.38□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Dhx16G3X8X0 1044 aaKnown RBP13.37□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Cplx2P84086 134 aa13.37□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Rnf187Q8BFX1 236 aa13.37□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Fan1Q69ZT1 1020 aa13.37□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Ift57Q8BXG3 429 aa13.37□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Aebp1Q640N1 1128 aa13.37□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Zhx1P70121 873 aa13.36□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Psme1P97371 249 aa13.36□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Ddx11Q6AXC6 880 aa13.36□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Ccdc181Q80ZU5 509 aa13.35□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Commd10Q8JZY2 202 aa13.35□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Ccdc102aQ3TMW1 549 aa13.34□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 SelenooQ9DBC0 667 aa13.34□□□□□ -0.27
Gtf3c1-201ENSMUST00000055506 Kif16bB1AVY7 1312 aa13.33□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Gbp4Q61107 620 aa13.33□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 AknaQ80VW7 1404 aa13.33□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Stk31Q99MW1 1018 aa13.33□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Ubxn4Q8VCH8 506 aa13.33□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Abl1P00520 1123 aa13.33□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 A0A1L1SQF0 893 aa13.32□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Necab1Q8BG18 352 aa13.32□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Evc2Q8K1G2 1220 aa13.32□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Trim25Q61510 634 aaKnown RBP13.31□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Tmx1Q8VBT0 278 aa13.31□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Bcl2l13P59017 434 aa13.31□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Phf14Q9D4H9 881 aa13.31□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Slc13a4Q8BZ82 625 aa13.31□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Ric3Q8BPM6 367 aa13.31□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 GsdmaQ9EST1 446 aa13.31□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 BcanQ61361 883 aa13.3□□□□□ -0.28
Gtf3c1-201ENSMUST00000055506 Txndc2Q6P902 515 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms