RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Bcl11bQ99PV8 884 aa14.99□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Nol10Q5RJG1 687 aaKnown RBP14.98□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Cdk19Q8BWD8 501 aa14.97□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Abcc1O35379 1528 aa14.97□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Clstn1Q9EPL2 979 aa14.97□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Pes1Q9EQ61 584 aaKnown RBP14.97□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Erich3F6QRE9 1637 aa14.97□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Znf326O88291 580 aa14.96□□□□□ -0.01
Pcif1-201ENSMUST00000041643 Ralbp1Q62172 648 aa14.96□□□□□ -0.01
Pcif1-201ENSMUST00000041643 MccE9PWI3 1003 aa14.96□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Gm156Q58A37 223 aa14.96□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Sall3Q62255 1320 aa14.95□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Pbrm1Q8BSQ9 1634 aaKnown RBP14.95□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Evi5lH3BKQ3 813 aa14.95□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Plcb2A3KGF7 1181 aa14.95□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Ppp2r1aQ76MZ3 589 aa14.95□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Sh3bp5Q9Z131 463 aa14.95□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Magi3Q9EQJ9 1476 aa14.95□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Gapvd1Q6PAR5 1458 aa14.94□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Asxl1P59598 1514 aa14.94□□□□□ -0.02
Pcif1-201ENSMUST00000041643 3425401B19RikD3Z1D3 1412 aa14.93□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Rusc2Q80U22 1514 aa14.93□□□□□ -0.02
Pcif1-201ENSMUST00000041643 G3bp1P97855 465 aaKnown RBP14.93□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Q7TT23 1179 aa14.93□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Nup160Q9Z0W3 1402 aaKnown RBP14.92□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Rab3gap2Q8BMG7 1366 aa14.92□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Htatsf1Q8BGC0 757 aa14.91□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Slc52a2Q9D8F3 450 aa14.91□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Chmp7Q8R1T1 451 aa14.91□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Wdr7Q920I9 1489 aa14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Ubap1lG3UW59 384 aa14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Gsdma3Q5Y4Y6 464 aa14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Plekhg5Q66T02 1073 aa14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 GphnQ8BUV3 769 aaKnown RBP14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 TatQ8QZR1 454 aa14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Washc2Q6PGL7 1334 aa14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 HnrnpmQ9D0E1 729 aaKnown RBP14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 PnisrA2AJT4 805 aaKnown RBP14.9□□□□□ -0.02
Pcif1-201ENSMUST00000041643 Trappc8E9PWG2 1437 aa14.89□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Rassf8Q8CJ96 419 aa14.89□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Ccdc30Q8BVF4 654 aa14.89□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Chmp3Q9CQ10 224 aa14.89□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Abca5Q8K448 1642 aa14.89□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Sirt1Q923E4 737 aa14.88□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Lrriq1Q0P5X1 1673 aa14.88□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Peg3Q3URU2 1571 aa14.88□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Usp16Q99LG0 825 aa14.88□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Swt1Q9DBQ9 907 aa14.88□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Ciz1Q8VEH2 845 aa14.87□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Mfap1aC0HKD8 439 aaKnown RBP14.87□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Mfap1bC0HKD9 439 aaKnown RBP14.87□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Arhgef12Q8R4H2 1543 aaKnown RBP14.87□□□□□ -0.03
Pcif1-201ENSMUST00000041643 PtmaP26350 111 aa14.87□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Adcy10Q8C0T9 1614 aa14.86□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Ylpm1Q9R0I7 1386 aaKnown RBP14.86□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Slc4a10Q5DTL9 1118 aa14.86□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Pde3bQ61409 1100 aa14.86□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Unc13aQ4KUS2 1712 aa14.86□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Kif16bB1AVY7 1312 aa14.86□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Dennd6aQ8BH65 605 aa14.86□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Polr3aB2RXC6 1390 aa14.85□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Gnai1B2RSH2 354 aa14.85□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Gnai3Q9DC51 354 aa14.85□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Slc4a2P13808 1237 aaKnown RBP14.85□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Rprd2Q6NXI6 1469 aaKnown RBP14.85□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Rbm25B2RY56 838 aaKnown RBP14.84□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Ipo8Q7TMY7 1010 aa14.84□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Kdm5bQ80Y84 1544 aa14.84□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Zpr1Q62384 459 aa14.84□□□□□ -0.03
Pcif1-201ENSMUST00000041643 MpripP97434 1024 aa14.84□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Atp7aQ64430 1491 aa14.84□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Pik3c2gO70167 1506 aa14.84□□□□□ -0.03
Pcif1-201ENSMUST00000041643 Gm10471E9Q1C7 252 aa14.83□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Ccdc146E9Q9F7 977 aa14.83□□□□□ -0.04
Pcif1-201ENSMUST00000041643 PrxO55103 1391 aa14.83□□□□□ -0.04
Pcif1-201ENSMUST00000041643 DroshaQ5HZJ0 1373 aaKnown RBP14.82□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Ccdc27Q3V036 639 aa14.82□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Brpf1B2RRD7 1212 aa14.82□□□□□ -0.04
Pcif1-201ENSMUST00000041643 MecomP14404 1042 aa14.81□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Cfap74Q3UY96 1578 aa14.81□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Cc2d1aQ8K1A6 943 aa14.81□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Trim58Q5NCC9 485 aa14.81□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Eif4g3Q80XI3 1579 aaKnown RBP14.8□□□□□ -0.04
Pcif1-201ENSMUST00000041643 GorabQ8BRM2 368 aa14.8□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Naip5Q9R016 1403 aa14.79□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Cgnl1Q6AW69 1298 aa14.79□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Ric3Q8BPM6 367 aa14.79□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Dnai1Q8C0M8 701 aa14.79□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Apaf1O88879 1249 aa14.79□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Fmnl2A2APV2 1086 aa14.79□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Arhgef40Q3UPH7 1517 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Adgrb2Q8CGM1 1561 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Nectin2P32507 530 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Gimap6Q8K349 305 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Gm21698A0A087WQP8 267 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Gm21671G3UY31 267 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Trim44Q9QXA7 346 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Ssh2Q5SW75 1423 aa14.78□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Q3UJC8 639 aa14.77□□□□□ -0.04
Pcif1-201ENSMUST00000041643 Zranb3Q6NZP1 1069 aa14.77□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms