RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Pbrm1Q8BSQ9 1634 aaKnown RBP12.02□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Rfx7F8VPJ6 1459 aa12.02□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Ggt6Q6PDE7 497 aa12.01□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Atp7aQ64430 1491 aa12.01□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Arhgef11Q68FM7 1552 aa12.01□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Golga2Q921M4 999 aa12.01□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Stard8Q8K031 1019 aa12.01□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Egfem1Q8C088 590 aa12□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Gsto1O09131 240 aa11.99□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Tsen2Q6P7W5 460 aa11.99□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Mak16Q8BGS0 296 aaKnown RBP11.99□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Adgrl3Q80TS3 1537 aa11.99□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Evi5lH3BKQ3 813 aa11.99□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Naip5Q9R016 1403 aa11.99□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Asxl2Q8BZ32 1370 aa11.98□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Gm21190A0A0G2JGJ6 266 aa11.98□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Spryd3E9Q9B3 442 aa11.98□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Rprd2Q6NXI6 1469 aaKnown RBP11.97□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Bcl11bQ99PV8 884 aa11.97□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Tnnt1O88346 262 aa11.97□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Fgd1P52734 960 aa11.97□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Kdm6bQ5NCY0 1641 aa11.96□□□□□ -0.49
Rnf43-201ENSMUST00000040089 Pknox2Q8BG99 474 aa11.96□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Znf330Q922H9 316 aa11.96□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Vsig10D3YX43 558 aa11.96□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Tmco5bQ80X59 307 aa11.96□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Kdm3bQ6ZPY7 1562 aa11.95□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Cdk19Q8BWD8 501 aa11.95□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Map3k4O08648 1597 aa11.95□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Hsp90ab1P11499 724 aaKnown RBP11.95□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Iqcf3Q9D498 203 aa11.95□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Chmp5Q9D7S9 219 aa11.95□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Peg3Q3URU2 1571 aa11.94□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Ylpm1Q9R0I7 1386 aaKnown RBP11.94□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Rtn4Q99P72 1162 aaKnown RBP11.94□□□□□ -0.5
Rnf43-201ENSMUST00000040089 PnisrA2AJT4 805 aaKnown RBP11.93□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Cyb5rlB1AS42 316 aa11.92□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Ksr2Q3UVC0 959 aa11.92□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Dnmt1P13864 1620 aaKnown RBP11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Ubap1lG3UW59 384 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 L3mbtl2P59178 703 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Rwdd1Q9CQK7 243 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Depdc5P61460 1591 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 GsdmaQ9EST1 446 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Mroh2aD3Z750 1679 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 PrxO55103 1391 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Cep170Q6A065 1588 aa11.91□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Apaf1O88879 1249 aa11.9□□□□□ -0.5
Rnf43-201ENSMUST00000040089 Pik3c2gO70167 1506 aa11.9□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Rock1P70335 1354 aa11.89□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Pcdh10E9PXQ7 1057 aa11.89□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Fyb1O35601 819 aa11.89□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Ipo4Q8VI75 1082 aa11.89□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Rrbp1Q99PL5 1605 aaKnown RBP11.88□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Rtf1A2AQ19 715 aaKnown RBP11.88□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Ppp2r1aQ76MZ3 589 aa11.88□□□□□ -0.51
Rnf43-201ENSMUST00000040089 GphnQ8BUV3 769 aaKnown RBP11.88□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Setd1bQ8CFT2 1985 aa11.88□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Camsap2Q8C1B1 1461 aa11.88□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Cluap1Q8R3P7 413 aa11.88□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Znf518aB2RRF6 1478 aaKnown RBP11.87□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Dnajc5gQ8C632 165 aa11.87□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Kiaa1551Q5DTW7 1521 aa11.87□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Zfp444Q3TDV8 331 aaKnown RBP11.87□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Polr3aB2RXC6 1390 aa11.86□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Yeats2Q3TUF7 1407 aa11.86□□□□□ -0.51
Rnf43-201ENSMUST00000040089 AlkP97793 1621 aa11.86□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Atf3Q60765 181 aa11.85□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Slc52a2Q9D8F3 450 aa11.85□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Cfap65Q3V0B4 1847 aa11.85□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Gli2Q0VGT2 1544 aa11.85□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Gcc2Q8CHG3 1679 aa11.84□□□□□ -0.51
Rnf43-201ENSMUST00000040089 GnpatP98192 678 aa11.84□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Dnai1Q8C0M8 701 aa11.84□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Q3UJC8 639 aa11.84□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Plekhg5Q66T02 1073 aa11.84□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Lrrc9Q8CDN9 1456 aa11.84□□□□□ -0.51
Rnf43-201ENSMUST00000040089 DroshaQ5HZJ0 1373 aaKnown RBP11.84□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Ppm1gQ61074 542 aa11.83□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Q8BT18 775 aa11.83□□□□□ -0.51
Rnf43-201ENSMUST00000040089 Gm10563F6WIE4 79 aa11.83□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Q3TQI7 289 aaKnown RBP11.82□□□□□ -0.52
Rnf43-201ENSMUST00000040089 FanciQ8K368 1330 aa11.82□□□□□ -0.52
Rnf43-201ENSMUST00000040089 SphkapQ6NSW3 1687 aa11.82□□□□□ -0.52
Rnf43-201ENSMUST00000040089 MpripP97434 1024 aa11.82□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Stk31Q99MW1 1018 aa11.82□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Sart3Q9JLI8 962 aaKnown RBP11.82□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Cfap74Q3UY96 1578 aa11.82□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Adgrl2Q8JZZ7 1487 aa11.81□□□□□ -0.52
Rnf43-201ENSMUST00000040089 DekQ7TNV0 380 aaKnown RBP11.81□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Asxl1P59598 1514 aa11.81□□□□□ -0.52
Rnf43-201ENSMUST00000040089 TatQ8QZR1 454 aa11.81□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Ncoa1P70365 1447 aa11.81□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Dennd4bQ3U1Y4 1499 aa11.8□□□□□ -0.52
Rnf43-201ENSMUST00000040089 AU015836B2RUM3 263 aa11.8□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Fam208aQ69ZR9 1610 aaKnown RBP11.8□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Tmem94Q7TSH8 1360 aa11.8□□□□□ -0.52
Rnf43-201ENSMUST00000040089 NudcO35685 332 aaKnown RBP11.8□□□□□ -0.52
Rnf43-201ENSMUST00000040089 NpatQ8BMA5 1420 aa11.8□□□□□ -0.52
Rnf43-201ENSMUST00000040089 Prkrip1Q9CWV6 186 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms