RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C PFA4Q12006 378 aa3.99□□□□□ -1.77
GDE1YPL110C TIR4Q12218 487 aaPredicted RBP3.99□□□□□ -1.77
GDE1YPL110C FRE7Q12333 620 aa3.99□□□□□ -1.77
GDE1YPL110C RFA3P26755 122 aaKnown RBP3.99□□□□□ -1.77
GDE1YPL110C RAD23P32628 398 aaKnown RBP3.99□□□□□ -1.77
GDE1YPL110C MTR2P34232 184 aaKnown RBP3.99□□□□□ -1.77
GDE1YPL110C VID24P38263 362 aa3.99□□□□□ -1.77
GDE1YPL110C RPS20P38701 121 aaKnown RBP3.99□□□□□ -1.77
GDE1YPL110C MUP1P50276 574 aa3.99□□□□□ -1.77
GDE1YPL110C HHT1P61830 136 aa3.99□□□□□ -1.77
GDE1YPL110C RAV2Q03956 351 aa3.99□□□□□ -1.77
GDE1YPL110C FLO1P32768 1537 aa3.99□□□□□ -1.77
GDE1YPL110C MRP17P28778 131 aa3.98□□□□□ -1.77
GDE1YPL110C ARO9P38840 513 aaPredicted RBP3.98□□□□□ -1.77
GDE1YPL110C GCV3P39726 170 aaPredicted RBP3.98□□□□□ -1.77
GDE1YPL110C MGA1P53050 456 aa3.98□□□□□ -1.77
GDE1YPL110C THG1P53215 237 aaKnown RBP3.98□□□□□ -1.77
GDE1YPL110C COX18P53239 316 aa3.98□□□□□ -1.77
GDE1YPL110C BIO4P53630 237 aa3.98□□□□□ -1.77
GDE1YPL110C EFM6P53970 246 aa3.98□□□□□ -1.77
GDE1YPL110C STP4Q07351 490 aa3.98□□□□□ -1.77
GDE1YPL110C NAT5Q08689 176 aa3.98□□□□□ -1.77
GDE1YPL110C MCP1Q12106 302 aa3.98□□□□□ -1.77
GDE1YPL110C TY2A-FP0CX61 438 aa3.98□□□□□ -1.77
GDE1YPL110C TY2A-GR2P0CX62 438 aa3.98□□□□□ -1.77
GDE1YPL110C OAC1P32332 324 aa3.98□□□□□ -1.77
GDE1YPL110C MCR1P36060 302 aaKnown RBP3.98□□□□□ -1.77
GDE1YPL110C CTR1P49573 406 aa3.98□□□□□ -1.77
GDE1YPL110C MPC1P53157 130 aaKnown RBP3.98□□□□□ -1.77
GDE1YPL110C CDH1P53197 566 aa3.98□□□□□ -1.77
GDE1YPL110C DAD3P69850 94 aa3.98□□□□□ -1.77
GDE1YPL110C PAU19P0CE85 124 aa3.98□□□□□ -1.77
GDE1YPL110C PAU21P0CE86 164 aa3.98□□□□□ -1.77
GDE1YPL110C PAU22P0CE87 164 aa3.98□□□□□ -1.77
GDE1YPL110C PAU3P25610 124 aa3.98□□□□□ -1.77
GDE1YPL110C TRR2P38816 342 aa3.98□□□□□ -1.77
GDE1YPL110C BAT1P38891 393 aaKnown RBP3.98□□□□□ -1.77
GDE1YPL110C YAL037WP39728 267 aa3.98□□□□□ -1.77
GDE1YPL110C AVT1P47082 602 aa3.98□□□□□ -1.77
GDE1YPL110C GRH1Q04410 372 aaKnown RBP3.98□□□□□ -1.77
GDE1YPL110C YPR174CQ06616 221 aaPredicted RBP3.98□□□□□ -1.77
GDE1YPL110C RRG7Q08774 242 aaPredicted RBP3.98□□□□□ -1.77
GDE1YPL110C MCT1Q12283 360 aa3.98□□□□□ -1.77
GDE1YPL110C COX17Q12287 69 aa3.98□□□□□ -1.77
GDE1YPL110C TY1A-NL1Q12391 440 aaKnown RBP3.98□□□□□ -1.77
GDE1YPL110C SUS1Q6WNK7 96 aa3.98□□□□□ -1.77
GDE1YPL110C SIR2P06700 562 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-LR1P0C2J4 438 aa3.97□□□□□ -1.77
GDE1YPL110C FCY2P17064 533 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-CP25383 438 aa3.97□□□□□ -1.77
GDE1YPL110C GAC1P28006 793 aa3.97□□□□□ -1.77
GDE1YPL110C YDL186WP48568 277 aa3.97□□□□□ -1.77
GDE1YPL110C YGL230CP53074 147 aa3.97□□□□□ -1.77
GDE1YPL110C RNH201P53942 307 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-DR2Q03483 438 aa3.97□□□□□ -1.77
GDE1YPL110C GRX8Q05926 109 aa3.97□□□□□ -1.77
GDE1YPL110C TDA6Q06466 467 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-BQ12260 438 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-OR2Q12293 438 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-DR1Q12392 438 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-OR1Q12439 438 aa3.97□□□□□ -1.77
GDE1YPL110C TY2A-DR3Q99303 438 aa3.97□□□□□ -1.77
GDE1YPL110C RPS25BP0C0T4 108 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C GAS1P22146 559 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C SFK1P35735 353 aa3.97□□□□□ -1.77
GDE1YPL110C ASC1P38011 319 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C PRS4P38063 326 aaPredicted RBP3.97□□□□□ -1.77
GDE1YPL110C MTC4P38335 694 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C COA1P40452 197 aa3.97□□□□□ -1.77
GDE1YPL110C YKR011CQ02209 353 aa3.97□□□□□ -1.77
GDE1YPL110C GRX5Q02784 150 aa3.97□□□□□ -1.77
GDE1YPL110C RCR2Q03446 210 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C HRI1Q05905 244 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C CSI2Q08054 341 aa3.97□□□□□ -1.77
GDE1YPL110C RPS25AQ3E792 108 aaPredicted RBP3.97□□□□□ -1.77
GDE1YPL110C SEC4P07560 215 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C DAT1P13483 248 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C MSI1P13712 422 aa3.97□□□□□ -1.77
GDE1YPL110C FUB1P25659 250 aa3.97□□□□□ -1.77
GDE1YPL110C GLC7P32598 312 aaKnown RBP3.97□□□□□ -1.77
GDE1YPL110C MSN2P33748 704 aa3.97□□□□□ -1.77
GDE1YPL110C PAD1P33751 242 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
GDE1YPL110C YFR057WP43625 151 aa3.97□□□□□ -1.77
GDE1YPL110C VHT1P53241 593 aa3.97□□□□□ -1.77
GDE1YPL110C YLR049CQ12110 428 aa3.97□□□□□ -1.77
GDE1YPL110C ERG8P24521 451 aa3.96□□□□□ -1.78
GDE1YPL110C GAR1P28007 205 aaKnown RBP3.96□□□□□ -1.78
GDE1YPL110C URA10P30402 227 aa3.96□□□□□ -1.78
GDE1YPL110C NTF2P33331 125 aaKnown RBP3.96□□□□□ -1.78
GDE1YPL110C YKL187CP34231 750 aa3.96□□□□□ -1.78
GDE1YPL110C MRPL11P36521 249 aaPredicted RBP3.96□□□□□ -1.78
GDE1YPL110C AVT2P39981 480 aa3.96□□□□□ -1.78
GDE1YPL110C MIC26P50087 233 aa3.96□□□□□ -1.78
GDE1YPL110C SDT1P53078 280 aa3.96□□□□□ -1.78
GDE1YPL110C SMM1P53720 384 aaKnown RBP3.96□□□□□ -1.78
GDE1YPL110C AIM11P87275 137 aa3.96□□□□□ -1.78
GDE1YPL110C FIT1Q04433 528 aa3.96□□□□□ -1.78
GDE1YPL110C MRX8Q05473 314 aa3.96□□□□□ -1.78
GDE1YPL110C SWC7Q06707 132 aa3.96□□□□□ -1.78
GDE1YPL110C GEP3Q08622 556 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 60.2 ms