RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C CUE4Q04201 117 aaPredicted RBP4.46□□□□□ -1.69
SEC39YLR440C TAZ1Q06510 381 aa4.46□□□□□ -1.69
SEC39YLR440C YLR030WQ07967 263 aa4.46□□□□□ -1.69
SEC39YLR440C AIM39Q08223 395 aa4.46□□□□□ -1.69
SEC39YLR440C CAP2P13517 287 aa4.46□□□□□ -1.7
SEC39YLR440C YBR241CP38142 488 aa4.46□□□□□ -1.7
SEC39YLR440C IPT1P38954 527 aa4.46□□□□□ -1.7
SEC39YLR440C LYS1P38998 373 aaRIP-Chip data4.46□□□□□ -1.7not detected
SEC39YLR440C FAA2P39518 744 aa4.46□□□□□ -1.7
SEC39YLR440C SPC25P40014 221 aa4.46□□□□□ -1.7
SEC39YLR440C SNM1P40993 198 aa4.46□□□□□ -1.7
SEC39YLR440C UBX6P47049 396 aa4.46□□□□□ -1.7
SEC39YLR440C DAN4P47179 1161 aa4.46□□□□□ -1.7
SEC39YLR440C YNR048WP53740 393 aa4.46□□□□□ -1.7
SEC39YLR440C HSK3P69852 69 aa4.46□□□□□ -1.7
SEC39YLR440C GRH1Q04410 372 aaKnown RBP4.46□□□□□ -1.7
SEC39YLR440C MHT1Q12525 324 aa4.46□□□□□ -1.7
SEC39YLR440C SUC2P00724 532 aa4.45□□□□□ -1.7
SEC39YLR440C TRX3P25372 127 aa4.45□□□□□ -1.7
SEC39YLR440C OAC1P32332 324 aa4.45□□□□□ -1.7
SEC39YLR440C SHB17P36136 271 aaKnown RBP4.45□□□□□ -1.7
SEC39YLR440C YHL049CP38722 271 aa4.45□□□□□ -1.7
SEC39YLR440C GAA1P39012 614 aa4.45□□□□□ -1.7
SEC39YLR440C YER188WP40103 239 aa4.45□□□□□ -1.7
SEC39YLR440C SSY5P47002 699 aa4.45□□□□□ -1.7
SEC39YLR440C COQ5P49017 307 aa4.45□□□□□ -1.7
SEC39YLR440C YGL230CP53074 147 aa4.45□□□□□ -1.7
SEC39YLR440C APJ1P53940 528 aa4.45□□□□□ -1.7
SEC39YLR440C GPI15P53961 229 aa4.45□□□□□ -1.7
SEC39YLR440C ERP1Q05359 219 aaKnown RBP4.45□□□□□ -1.7
SEC39YLR440C GPI11Q06636 219 aa4.45□□□□□ -1.7
SEC39YLR440C SWC7Q06707 132 aa4.45□□□□□ -1.7
SEC39YLR440C TEN1Q07921 160 aa4.45□□□□□ -1.7
SEC39YLR440C RDL2Q08742 149 aaKnown RBP4.45□□□□□ -1.7
SEC39YLR440C FRE7Q12333 620 aa4.45□□□□□ -1.7
SEC39YLR440C KTI11Q3E840 82 aa4.45□□□□□ -1.7
SEC39YLR440C RAD52P06778 471 aaKnown RBP4.45□□□□□ -1.7
SEC39YLR440C MAK31P23059 88 aa4.45□□□□□ -1.7
SEC39YLR440C SLM5P25345 492 aaKnown RBP4.45□□□□□ -1.7
SEC39YLR440C MRPL28P36527 147 aa4.45□□□□□ -1.7
SEC39YLR440C YHK8P38776 514 aa4.45□□□□□ -1.7
SEC39YLR440C TAD2P47058 250 aa4.45□□□□□ -1.7
SEC39YLR440C SBH1P52870 82 aa4.45□□□□□ -1.7
SEC39YLR440C YGR015CP53208 328 aa4.45□□□□□ -1.7
SEC39YLR440C KTR5P53966 522 aaPredicted RBP4.45□□□□□ -1.7
SEC39YLR440C THI74Q04083 370 aa4.45□□□□□ -1.7
SEC39YLR440C HEM25Q07534 307 aa4.45□□□□□ -1.7
SEC39YLR440C THP1Q08231 455 aa4.45□□□□□ -1.7
SEC39YLR440C BI2P03873 423 aa4.44□□□□□ -1.7
SEC39YLR440C YPR170W-BP0C5R9 85 aa4.44□□□□□ -1.7
SEC39YLR440C PEX34P25584 144 aa4.44□□□□□ -1.7
SEC39YLR440C MOH1P38191 138 aa4.44□□□□□ -1.7
SEC39YLR440C YIL024CP40543 189 aa4.44□□□□□ -1.7
SEC39YLR440C HNT2P49775 206 aa4.44□□□□□ -1.7
SEC39YLR440C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SEC39YLR440C SDC1Q03323 175 aa4.44□□□□□ -1.7
SEC39YLR440C HRI1Q05905 244 aaKnown RBP4.44□□□□□ -1.7
SEC39YLR440C YOL024WQ08172 172 aa4.44□□□□□ -1.7
SEC39YLR440C ORT1Q12375 292 aa4.44□□□□□ -1.7
SEC39YLR440C PAI3P01094 68 aa4.43□□□□□ -1.7
SEC39YLR440C PEP4P07267 405 aaKnown RBP4.43□□□□□ -1.7
SEC39YLR440C UBC5P15732 148 aa4.43□□□□□ -1.7
SEC39YLR440C PRE2P30656 287 aaKnown RBP4.43□□□□□ -1.7
SEC39YLR440C PRE5P40302 234 aaKnown RBP4.43□□□□□ -1.7
SEC39YLR440C OST2P46964 130 aa4.43□□□□□ -1.7
SEC39YLR440C LCB3P47013 409 aa4.43□□□□□ -1.7
SEC39YLR440C OST3P48439 350 aa4.43□□□□□ -1.7
SEC39YLR440C SAY1P53324 424 aa4.43□□□□□ -1.7
SEC39YLR440C AAH1P53909 347 aa4.43□□□□□ -1.7
SEC39YLR440C YKR011CQ02209 353 aa4.43□□□□□ -1.7
SEC39YLR440C RCE1Q03530 315 aa4.43□□□□□ -1.7
SEC39YLR440C NUP53Q03790 475 aa4.43□□□□□ -1.7
SEC39YLR440C YDL007C-AQ2V2Q0 85 aa4.43□□□□□ -1.7
SEC39YLR440C YEL009C-AA0A023PZF2 135 aa4.43□□□□□ -1.7
SEC39YLR440C RAD6P06104 172 aa4.43□□□□□ -1.7
SEC39YLR440C RPL12AP0CX53 165 aaKnown RBP4.43□□□□□ -1.7
SEC39YLR440C RPL12BP0CX54 165 aa4.43□□□□□ -1.7
SEC39YLR440C YCR007CP25354 239 aa4.43□□□□□ -1.7
SEC39YLR440C YCL002CP25565 263 aa4.43□□□□□ -1.7
SEC39YLR440C YCR100CP25606 316 aa4.43□□□□□ -1.7
SEC39YLR440C YSC83P32792 385 aa4.43□□□□□ -1.7
SEC39YLR440C ECM33P38248 429 aaKnown RBP4.43□□□□□ -1.7
SEC39YLR440C ECM14P38836 430 aa4.43□□□□□ -1.7
SEC39YLR440C YHR177WP38867 453 aa4.43□□□□□ -1.7
SEC39YLR440C MET30P39014 640 aa4.43□□□□□ -1.7
SEC39YLR440C YEA4P40004 342 aa4.43□□□□□ -1.7
SEC39YLR440C SNO3P43544 222 aa4.43□□□□□ -1.7
SEC39YLR440C GON7P46984 123 aa4.43□□□□□ -1.7
SEC39YLR440C TAX4P47030 604 aa4.43□□□□□ -1.7
SEC39YLR440C MCM22P47167 239 aa4.43□□□□□ -1.7
SEC39YLR440C SYF2P53277 215 aaPredicted RBP4.43□□□□□ -1.7
SEC39YLR440C SNO2P53823 222 aa4.43□□□□□ -1.7
SEC39YLR440C WSC2P53832 503 aa4.43□□□□□ -1.7
SEC39YLR440C FMP41P53889 259 aaKnown RBP4.43□□□□□ -1.7
SEC39YLR440C YLR152CP54072 576 aa4.43□□□□□ -1.7
SEC39YLR440C UTP15Q04305 513 aaKnown RBP4.43□□□□□ -1.7
SEC39YLR440C ECI1Q05871 280 aa4.43□□□□□ -1.7
SEC39YLR440C POS5Q06892 414 aa4.43□□□□□ -1.7
SEC39YLR440C COQ10Q08058 207 aa4.43□□□□□ -1.7
SEC39YLR440C ICT1Q12385 394 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms