RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W SDH8P38345 138 aa3.79□□□□□ -1.8
SSH4YKL124W ECM14P38836 430 aa3.79□□□□□ -1.8
SSH4YKL124W YIL029CP40538 142 aa3.79□□□□□ -1.8
SSH4YKL124W MOG1P47123 218 aa3.79□□□□□ -1.8
SSH4YKL124W RPL15BP54780 204 aaPredicted RBP3.79□□□□□ -1.8
SSH4YKL124W GMC1Q04399 608 aa3.79□□□□□ -1.8
SSH4YKL124W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SSH4YKL124W RRS1Q08746 203 aaKnown RBP3.79□□□□□ -1.8
SSH4YKL124W FRE5Q08908 694 aa3.79□□□□□ -1.8
SSH4YKL124W FYV7Q12247 151 aa3.79□□□□□ -1.8
SSH4YKL124W RNH203Q12338 110 aa3.79□□□□□ -1.8
SSH4YKL124W AGC1Q12482 902 aa3.79□□□□□ -1.8
SSH4YKL124W REP1P03871 373 aa3.78□□□□□ -1.8
SSH4YKL124W RPS13P05756 151 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W YML003WP0CF16 290 aa3.78□□□□□ -1.8
SSH4YKL124W CPT1P17898 393 aa3.78□□□□□ -1.8
SSH4YKL124W IDP1P21954 428 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W LAC1P28496 418 aa3.78□□□□□ -1.8
SSH4YKL124W TCM62P38228 572 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W GOS1P38736 223 aa3.78□□□□□ -1.8
SSH4YKL124W PAC2P39937 518 aa3.78□□□□□ -1.8
SSH4YKL124W RMD6P39975 231 aa3.78□□□□□ -1.8
SSH4YKL124W EGT2P42835 1041 aa3.78□□□□□ -1.8
SSH4YKL124W YDL186WP48568 277 aa3.78□□□□□ -1.8
SSH4YKL124W SKP1P52286 194 aa3.78□□□□□ -1.8
SSH4YKL124W TIM44Q01852 431 aa3.78□□□□□ -1.8
SSH4YKL124W MRX8Q05473 314 aa3.78□□□□□ -1.8
SSH4YKL124W ASR1Q06834 288 aa3.78□□□□□ -1.8
SSH4YKL124W FCY22Q12119 530 aa3.78□□□□□ -1.8
SSH4YKL124W USB1Q12208 290 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W PST2Q12335 198 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W AIM45Q12480 344 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W YBR085C-AO43137 85 aa3.78□□□□□ -1.8
SSH4YKL124W MES1P00958 751 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W YGL041W-AP0C5N3 154 aa3.78□□□□□ -1.8
SSH4YKL124W IFM1P25038 676 aa3.78□□□□□ -1.8
SSH4YKL124W RNA15P25299 296 aaPredicted RBP3.78□□□□□ -1.8
SSH4YKL124W GLC7P32598 312 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W RIB5P38145 238 aa3.78□□□□□ -1.8
SSH4YKL124W IKI1P38874 309 aa3.78□□□□□ -1.8
SSH4YKL124W IPT1P38954 527 aa3.78□□□□□ -1.8
SSH4YKL124W YIR020CP40575 100 aa3.78□□□□□ -1.8
SSH4YKL124W NCA3P46955 337 aa3.78□□□□□ -1.8
SSH4YKL124W HHT1P61830 136 aa3.78□□□□□ -1.8
SSH4YKL124W YPL108WQ02872 168 aaPredicted RBP3.78□□□□□ -1.8
SSH4YKL124W YMR099CQ03161 297 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W YMR087WQ04299 284 aa3.78□□□□□ -1.8
SSH4YKL124W YMR315WQ04869 349 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W ADH6Q04894 360 aaKnown RBP3.78□□□□□ -1.8
SSH4YKL124W TPO3Q06451 622 aa3.78□□□□□ -1.8
SSH4YKL124W YLR031WQ07978 186 aa3.78□□□□□ -1.8
SSH4YKL124W BBP1Q12365 385 aa3.78□□□□□ -1.8
SSH4YKL124W URA2P07259 2214 aaKnown RBP3.77□□□□□ -1.81
SSH4YKL124W PUT3P25502 979 aaPredicted RBP3.77□□□□□ -1.81
SSH4YKL124W TRR1P29509 319 aaKnown RBP3.77□□□□□ -1.81
SSH4YKL124W YKL162CP36052 402 aa3.77□□□□□ -1.81
SSH4YKL124W YBR285WP38354 144 aa3.77□□□□□ -1.81
SSH4YKL124W OXA1P39952 402 aa3.77□□□□□ -1.81
SSH4YKL124W GLR1P41921 483 aaKnown RBP3.77□□□□□ -1.81
SSH4YKL124W TAX4P47030 604 aa3.77□□□□□ -1.81
SSH4YKL124W SSK1Q07084 712 aa3.77□□□□□ -1.81
SSH4YKL124W CUP2P15315 225 aa3.76□□□□□ -1.81
SSH4YKL124W ELO2P25358 347 aa3.76□□□□□ -1.81
SSH4YKL124W ARC40P38328 384 aaKnown RBP3.76□□□□□ -1.81
SSH4YKL124W YHR035WP38769 630 aa3.76□□□□□ -1.81
SSH4YKL124W ARO9P38840 513 aaPredicted RBP3.76□□□□□ -1.81
SSH4YKL124W FLX1P40464 311 aa3.76□□□□□ -1.81
SSH4YKL124W PHB2P50085 310 aa3.76□□□□□ -1.81
SSH4YKL124W ARL3Q02804 198 aa3.76□□□□□ -1.81
SSH4YKL124W YPL077CQ02831 240 aa3.76□□□□□ -1.81
SSH4YKL124W YPR098CQ06089 161 aa3.76□□□□□ -1.81
SSH4YKL124W YNG1Q08465 219 aa3.76□□□□□ -1.81
SSH4YKL124W POM33Q12164 279 aa3.76□□□□□ -1.81
SSH4YKL124W RDL1Q12305 139 aaKnown RBP3.76□□□□□ -1.81
SSH4YKL124W COX5BP00425 151 aa3.75□□□□□ -1.81
SSH4YKL124W CHO1P08456 276 aa3.75□□□□□ -1.81
SSH4YKL124W RPS28BP0C0X0 67 aaKnown RBP3.75□□□□□ -1.81
SSH4YKL124W RFA1P22336 621 aaKnown RBP3.75□□□□□ -1.81
SSH4YKL124W PUB1P32588 453 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
SSH4YKL124W IES6P32617 166 aa3.75□□□□□ -1.81
SSH4YKL124W REC114P32841 428 aa3.75□□□□□ -1.81
SSH4YKL124W SRL3P36167 246 aa3.75□□□□□ -1.81
SSH4YKL124W FRM2P37261 193 aa3.75□□□□□ -1.81
SSH4YKL124W FMP23P38231 175 aa3.75□□□□□ -1.81
SSH4YKL124W MDM31P38880 579 aa3.75□□□□□ -1.81
SSH4YKL124W BMT5P40493 336 aa3.75□□□□□ -1.81
SSH4YKL124W OST1P41543 476 aaKnown RBP3.75□□□□□ -1.81
SSH4YKL124W MGA1P53050 456 aa3.75□□□□□ -1.81
SSH4YKL124W JAC1P53193 184 aa3.75□□□□□ -1.81
SSH4YKL124W YNR048WP53740 393 aa3.75□□□□□ -1.81
SSH4YKL124W ASI3P53983 676 aa3.75□□□□□ -1.81
SSH4YKL124W CWC27Q02770 301 aa3.75□□□□□ -1.81
SSH4YKL124W GPI17Q04080 534 aa3.75□□□□□ -1.81
SSH4YKL124W DLT1Q04216 342 aa3.75□□□□□ -1.81
SSH4YKL124W GAL83Q04739 417 aa3.75□□□□□ -1.81
SSH4YKL124W ASM4Q05166 528 aa3.75□□□□□ -1.81
SSH4YKL124W DPP1Q05521 289 aa3.75□□□□□ -1.81
SSH4YKL124W FRQ1Q06389 190 aa3.75□□□□□ -1.81
SSH4YKL124W MHR1Q06630 226 aa3.75□□□□□ -1.81
SSH4YKL124W RPS28AQ3E7X9 67 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 66.7 ms