RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W REX3Q12090 404 aa3.27□□□□□ -1.89
SPT6YGR116W ISA2Q12425 185 aa3.27□□□□□ -1.89
SPT6YGR116W ADH2P00331 348 aaKnown RBP3.27□□□□□ -1.89
SPT6YGR116W FLO5P38894 1075 aa3.27□□□□□ -1.89
SPT6YGR116W VNX1P42839 908 aa3.27□□□□□ -1.89
SPT6YGR116W XPT1P47165 209 aa3.27□□□□□ -1.89
SPT6YGR116W TRI1Q05024 226 aa3.27□□□□□ -1.89
SPT6YGR116W YOL024WQ08172 172 aa3.27□□□□□ -1.89
SPT6YGR116W BSC6Q08280 497 aa3.27□□□□□ -1.89
SPT6YGR116W HUT1Q12520 339 aa3.27□□□□□ -1.89
SPT6YGR116W MDH2P22133 377 aa3.27□□□□□ -1.89
SPT6YGR116W SPO13P23624 291 aa3.27□□□□□ -1.89
SPT6YGR116W DAL3P32459 195 aa3.27□□□□□ -1.89
SPT6YGR116W PAD1P33751 242 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
SPT6YGR116W DAD2P36162 133 aa3.27□□□□□ -1.89
SPT6YGR116W MRPL16P38064 232 aa3.27□□□□□ -1.89
SPT6YGR116W YIL089WP40500 205 aa3.27□□□□□ -1.89
SPT6YGR116W FAF1P40546 346 aaPredicted RBP3.27□□□□□ -1.89
SPT6YGR116W MTO1P53070 669 aa3.27□□□□□ -1.89
SPT6YGR116W YIP4P53093 235 aa3.27□□□□□ -1.89
SPT6YGR116W YGR151CP53287 111 aa3.27□□□□□ -1.89
SPT6YGR116W HOL1P53389 586 aa3.27□□□□□ -1.89
SPT6YGR116W YPL077CQ02831 240 aa3.27□□□□□ -1.89
SPT6YGR116W RCE1Q03530 315 aa3.27□□□□□ -1.89
SPT6YGR116W ROT1Q03691 256 aa3.27□□□□□ -1.89
SPT6YGR116W YMR166CQ03829 368 aa3.27□□□□□ -1.89
SPT6YGR116W SHH3Q04487 196 aa3.27□□□□□ -1.89
SPT6YGR116W GIM5Q04493 163 aa3.27□□□□□ -1.89
SPT6YGR116W CSI2Q08054 341 aa3.27□□□□□ -1.89
SPT6YGR116W HRT1Q08273 121 aa3.27□□□□□ -1.89
SPT6YGR116W NAT5Q08689 176 aa3.27□□□□□ -1.89
SPT6YGR116W LEU9Q12166 604 aaKnown RBP3.27□□□□□ -1.89
SPT6YGR116W FRE7Q12333 620 aa3.27□□□□□ -1.89
SPT6YGR116W FMP49A0A023PZB3 126 aa3.26□□□□□ -1.89
SPT6YGR116W CET1O13297 549 aaPredicted RBP3.26□□□□□ -1.89
SPT6YGR116W CPR2P23285 205 aa3.26□□□□□ -1.89
SPT6YGR116W SUA7P29055 345 aaPredicted RBP3.26□□□□□ -1.89
SPT6YGR116W HSV2P50079 448 aaPredicted RBP3.26□□□□□ -1.89
SPT6YGR116W YGR066CP53242 292 aa3.26□□□□□ -1.89
SPT6YGR116W YOL073CQ08232 322 aa3.26□□□□□ -1.89
SPT6YGR116W CSM4Q08955 156 aa3.26□□□□□ -1.89
SPT6YGR116W YDR157WA0A023PZE8 133 aa3.26□□□□□ -1.89
SPT6YGR116W YGL010WP25338 174 aa3.26□□□□□ -1.89
SPT6YGR116W GCS1P35197 352 aa3.26□□□□□ -1.89
SPT6YGR116W YBR197CP38306 217 aa3.26□□□□□ -1.89
SPT6YGR116W LSB3P43603 459 aaKnown RBP3.26□□□□□ -1.89
SPT6YGR116W TTI2P47168 421 aa3.26□□□□□ -1.89
SPT6YGR116W YML079WQ03629 201 aa3.26□□□□□ -1.89
SPT6YGR116W ATG10Q07879 167 aa3.26□□□□□ -1.89
SPT6YGR116W RPP2AP05319 106 aaKnown RBP3.26□□□□□ -1.89
SPT6YGR116W STE18P18852 110 aa3.26□□□□□ -1.89
SPT6YGR116W YJU3P28321 313 aa3.26□□□□□ -1.89
SPT6YGR116W PAU16P35994 123 aa3.26□□□□□ -1.89
SPT6YGR116W RPP1P38786 293 aa3.26□□□□□ -1.89
SPT6YGR116W COQ5P49017 307 aa3.26□□□□□ -1.89
SPT6YGR116W MSO1P53604 210 aaKnown RBP3.26□□□□□ -1.89
SPT6YGR116W PDR17P53844 350 aa3.26□□□□□ -1.89
SPT6YGR116W MRPL1Q04599 285 aa3.26□□□□□ -1.89
SPT6YGR116W PIB1Q06651 286 aa3.26□□□□□ -1.89
SPT6YGR116W RPS22AP0C0W1 130 aaKnown RBP3.26□□□□□ -1.89
SPT6YGR116W MRP49P32388 137 aa3.26□□□□□ -1.89
SPT6YGR116W NAS2P40555 220 aa3.26□□□□□ -1.89
SPT6YGR116W SUT2Q12286 268 aa3.26□□□□□ -1.89
SPT6YGR116W QCR9P22289 66 aa3.25□□□□□ -1.89
SPT6YGR116W MEK1P24719 497 aaPredicted RBP3.25□□□□□ -1.89
SPT6YGR116W MTC7P32633 139 aa3.25□□□□□ -1.89
SPT6YGR116W AUR1P36107 401 aaPredicted RBP3.25□□□□□ -1.89
SPT6YGR116W FRM2P37261 193 aa3.25□□□□□ -1.89
SPT6YGR116W BUD8P41698 603 aa3.25□□□□□ -1.89
SPT6YGR116W RNH201P53942 307 aa3.25□□□□□ -1.89
SPT6YGR116W ERG13P54839 491 aaKnown RBP3.25□□□□□ -1.89
SPT6YGR116W INP1Q03694 420 aa3.25□□□□□ -1.89
SPT6YGR116W NAT3Q06504 195 aa3.25□□□□□ -1.89
SPT6YGR116W PAM18Q07914 168 aa3.25□□□□□ -1.89
SPT6YGR116W ENB1Q08299 606 aa3.25□□□□□ -1.89
SPT6YGR116W SMT3Q12306 101 aaKnown RBP3.25□□□□□ -1.89
SPT6YGR116W YPR071WQ12346 211 aa3.25□□□□□ -1.89
SPT6YGR116W YLR111WQ12528 110 aa3.25□□□□□ -1.89
SPT6YGR116W SAL1D6W196 494 aa3.25□□□□□ -1.89
SPT6YGR116W RPP2BP02400 110 aaKnown RBP3.25□□□□□ -1.89
SPT6YGR116W SPO7P18410 259 aa3.25□□□□□ -1.89
SPT6YGR116W ARO4P32449 370 aaKnown RBP3.25□□□□□ -1.89
SPT6YGR116W SHB17P36136 271 aaKnown RBP3.25□□□□□ -1.89
SPT6YGR116W YNR064CP53750 290 aa3.25□□□□□ -1.89
SPT6YGR116W PET191Q02772 108 aa3.25□□□□□ -1.89
SPT6YGR116W YDR286CQ05530 114 aa3.25□□□□□ -1.89
SPT6YGR116W WTM2Q12206 467 aa3.25□□□□□ -1.89
SPT6YGR116W RPS22BQ3E7Y3 130 aaKnown RBP3.25□□□□□ -1.89
SPT6YGR116W SPT15P13393 240 aaKnown RBP3.25□□□□□ -1.89
SPT6YGR116W LST7P53237 242 aa3.25□□□□□ -1.89
SPT6YGR116W MPP6P53725 186 aaPredicted RBP3.25□□□□□ -1.89
SPT6YGR116W YOR105WQ08504 108 aa3.25□□□□□ -1.89
SPT6YGR116W COX2P00410 251 aa3.24□□□□□ -1.89
SPT6YGR116W PAI3P01094 68 aa3.24□□□□□ -1.89
SPT6YGR116W POR1P04840 283 aaKnown RBP3.24□□□□□ -1.89
SPT6YGR116W ERV1P27882 189 aa3.24□□□□□ -1.89
SPT6YGR116W ARO2P28777 376 aaKnown RBP3.24□□□□□ -1.89
SPT6YGR116W GLC7P32598 312 aaKnown RBP3.24□□□□□ -1.89
SPT6YGR116W UTR5P32630 166 aa3.24□□□□□ -1.89
SPT6YGR116W YKL102CP34249 101 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms