RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W ELC1Q03071 99 aa2.15□□□□□ -2.07
SPF1YEL031W YAP6Q03935 383 aa2.15□□□□□ -2.07
SPF1YEL031W YMR090WQ04304 227 aaKnown RBP2.15□□□□□ -2.07
SPF1YEL031W MSC3Q05812 728 aa2.15□□□□□ -2.07
SPF1YEL031W MRL1Q06815 381 aa2.15□□□□□ -2.07
SPF1YEL031W YLR030WQ07967 263 aa2.15□□□□□ -2.07
SPF1YEL031W RTK1Q12100 620 aaPredicted RBP2.15□□□□□ -2.07
SPF1YEL031W YDL211CQ12121 372 aa2.15□□□□□ -2.07
SPF1YEL031W CBS1P14066 229 aa2.14□□□□□ -2.07
SPF1YEL031W NUP1P20676 1076 aa2.14□□□□□ -2.07
SPF1YEL031W HYP2P23301 157 aaKnown RBP2.14□□□□□ -2.07
SPF1YEL031W SHB17P36136 271 aaKnown RBP2.14□□□□□ -2.07
SPF1YEL031W YBR096WP38256 230 aa2.14□□□□□ -2.07
SPF1YEL031W LRO1P40345 661 aa2.14□□□□□ -2.07
SPF1YEL031W APQ12P40532 138 aa2.14□□□□□ -2.07
SPF1YEL031W YIR016WP40572 265 aa2.14□□□□□ -2.07
SPF1YEL031W BOR1P53838 576 aa2.14□□□□□ -2.07
SPF1YEL031W DAD3P69850 94 aa2.14□□□□□ -2.07
SPF1YEL031W YMR206WQ03695 313 aa2.14□□□□□ -2.07
SPF1YEL031W YMR321CQ04898 105 aa2.14□□□□□ -2.07
SPF1YEL031W RTN1Q04947 295 aaKnown RBP2.14□□□□□ -2.07
SPF1YEL031W YPR174CQ06616 221 aaPredicted RBP2.14□□□□□ -2.07
SPF1YEL031W PRP11Q07350 266 aaPredicted RBP2.14□□□□□ -2.07
SPF1YEL031W CRT10Q08226 957 aa2.14□□□□□ -2.07
SPF1YEL031W LAA1P39526 2014 aa2.14□□□□□ -2.07
SPF1YEL031W YOR304C-AO14468 76 aa2.14□□□□□ -2.07
SPF1YEL031W RAD6P06104 172 aa2.14□□□□□ -2.07
SPF1YEL031W CPR1P14832 162 aaKnown RBP2.14□□□□□ -2.07
SPF1YEL031W QCR9P22289 66 aa2.14□□□□□ -2.07
SPF1YEL031W QDR3P38227 689 aa2.14□□□□□ -2.07
SPF1YEL031W SAF1P38352 637 aa2.14□□□□□ -2.07
SPF1YEL031W CYB5P40312 120 aa2.14□□□□□ -2.07
SPF1YEL031W MNN10P50108 393 aaKnown RBP2.14□□□□□ -2.07
SPF1YEL031W YGR117CP53270 476 aa2.14□□□□□ -2.07
SPF1YEL031W YNR061CP53747 219 aa2.14□□□□□ -2.07
SPF1YEL031W STD1Q02794 444 aa2.14□□□□□ -2.07
SPF1YEL031W YPL077CQ02831 240 aa2.14□□□□□ -2.07
SPF1YEL031W MTQ2Q03920 221 aaPredicted RBP2.14□□□□□ -2.07
SPF1YEL031W HED1Q03937 162 aa2.14□□□□□ -2.07
SPF1YEL031W YPL162CQ12042 273 aa2.14□□□□□ -2.07
SPF1YEL031W YLR050CQ12155 161 aaKnown RBP2.14□□□□□ -2.07
SPF1YEL031W YOR015WQ12169 119 aa2.14□□□□□ -2.07
SPF1YEL031W PST1Q12355 444 aa2.14□□□□□ -2.07
SPF1YEL031W ORT1Q12375 292 aa2.14□□□□□ -2.07
SPF1YEL031W NPC2Q12408 173 aa2.14□□□□□ -2.07
SPF1YEL031W RPS21AP0C0V8 87 aaKnown RBP2.13□□□□□ -2.07
SPF1YEL031W YPR170W-BP0C5R9 85 aa2.13□□□□□ -2.07
SPF1YEL031W MDH2P22133 377 aa2.13□□□□□ -2.07
SPF1YEL031W GPI12P23797 304 aa2.13□□□□□ -2.07
SPF1YEL031W GEX1P25596 615 aa2.13□□□□□ -2.07
SPF1YEL031W FUB1P25659 250 aa2.13□□□□□ -2.07
SPF1YEL031W PHO11P35842 467 aa2.13□□□□□ -2.07
SPF1YEL031W PHO12P38693 467 aa2.13□□□□□ -2.07
SPF1YEL031W PCL5P38794 229 aa2.13□□□□□ -2.07
SPF1YEL031W YPT35P38815 214 aaKnown RBP2.13□□□□□ -2.07
SPF1YEL031W YAR1P46683 200 aa2.13□□□□□ -2.07
SPF1YEL031W MIC27P50945 234 aa2.13□□□□□ -2.07
SPF1YEL031W YNL165WP53891 406 aa2.13□□□□□ -2.07
SPF1YEL031W PIR3Q03180 325 aa2.13□□□□□ -2.07
SPF1YEL031W NAT4Q04751 285 aa2.13□□□□□ -2.07
SPF1YEL031W FSF1Q12029 327 aaKnown RBP2.13□□□□□ -2.07
SPF1YEL031W MCT1Q12283 360 aa2.13□□□□□ -2.07
SPF1YEL031W YPR071WQ12346 211 aa2.13□□□□□ -2.07
SPF1YEL031W YLR363W-AQ3E747 85 aa2.13□□□□□ -2.07
SPF1YEL031W MSB2P32334 1306 aa2.13□□□□□ -2.07
SPF1YEL031W MSF1P08425 469 aa2.13□□□□□ -2.07
SPF1YEL031W TIR1P10863 254 aa2.13□□□□□ -2.07
SPF1YEL031W POX1P13711 748 aa2.13□□□□□ -2.07
SPF1YEL031W MSN1P22148 382 aa2.13□□□□□ -2.07
SPF1YEL031W MDL1P33310 695 aa2.13□□□□□ -2.07
SPF1YEL031W UPS2P35200 230 aa2.13□□□□□ -2.07
SPF1YEL031W CBP4P37267 147 aa2.13□□□□□ -2.07
SPF1YEL031W POA1P38218 177 aa2.13□□□□□ -2.07
SPF1YEL031W ICS2P38284 255 aa2.13□□□□□ -2.07
SPF1YEL031W YBR184WP38299 523 aa2.13□□□□□ -2.07
SPF1YEL031W YBR220CP38318 560 aa2.13□□□□□ -2.07
SPF1YEL031W PFS1P38872 237 aa2.13□□□□□ -2.07
SPF1YEL031W YEL073CP39974 107 aa2.13□□□□□ -2.07
SPF1YEL031W BTT1P40314 149 aaPredicted RBP2.13□□□□□ -2.07
SPF1YEL031W GPI2P46961 280 aa2.13□□□□□ -2.07
SPF1YEL031W YGL118CP53132 145 aa2.13□□□□□ -2.07
SPF1YEL031W YNL034WP53963 612 aa2.13□□□□□ -2.07
SPF1YEL031W ATG21Q02887 496 aa2.13□□□□□ -2.07
SPF1YEL031W YMR210WQ03649 449 aa2.13□□□□□ -2.07
SPF1YEL031W YMR082CQ04276 118 aa2.13□□□□□ -2.07
SPF1YEL031W FSH2Q05015 223 aa2.13□□□□□ -2.07
SPF1YEL031W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SPF1YEL031W FRE8Q12209 686 aa2.13□□□□□ -2.07
SPF1YEL031W FRE7Q12333 620 aa2.13□□□□□ -2.07
SPF1YEL031W ECM29P38737 1868 aa2.13□□□□□ -2.07
SPF1YEL031W FMP49A0A023PZB3 126 aa2.13□□□□□ -2.07
SPF1YEL031W HEM4P06174 275 aa2.13□□□□□ -2.07
SPF1YEL031W EMP70P32802 667 aa2.13□□□□□ -2.07
SPF1YEL031W SOF1P33750 489 aaKnown RBP2.13□□□□□ -2.07
SPF1YEL031W YHL026CP38740 315 aa2.13□□□□□ -2.07
SPF1YEL031W HEM14P40012 539 aa2.13□□□□□ -2.07
SPF1YEL031W GPP2P40106 250 aaKnown RBP2.13□□□□□ -2.07
SPF1YEL031W PCL7P40186 285 aa2.13□□□□□ -2.07
SPF1YEL031W PRE5P40302 234 aaKnown RBP2.13□□□□□ -2.07
SPF1YEL031W SEC24P40482 926 aaKnown RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 96.3 ms