RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 COLEC11Q9BWP8 271 aa13.27□□□□□ -0.29
LINC00339-213ENST00000642137 PRO3102Q9H379 93 aa13.27□□□□□ -0.29
LINC00339-213ENST00000642137 VRTNQ9H8Y1 702 aa13.27□□□□□ -0.29
LINC00339-213ENST00000642137 GOLGA2P5Q9HBQ8 144 aa13.27□□□□□ -0.29
LINC00339-213ENST00000642137 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.29
LINC00339-213ENST00000642137 COL4A6Q14031 1691 aa13.27□□□□□ -0.29
LINC00339-213ENST00000642137 CASTOR2A6NHX0 329 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 TMEM189-UBE2V1I3L0A0 370 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 PODXLO00592 558 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 NRP1O14786 923 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 AP5Z1O43299 807 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 ZC3H11AO75152 810 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC00339-213ENST00000642137 PNPLA4P41247 253 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 OR1G1P47890 313 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 ALDH7A1P49419 539 aaKnown RBP13.26□□□□□ -0.29
LINC00339-213ENST00000642137 MYL6P60660 151 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 MYO1EQ12965 1108 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 SCARA3Q6AZY7 606 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 CCDC150Q8NCX0 1101 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 SEMA4DQ92854 862 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 FAXDC2Q96IV6 333 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 XPO4Q9C0E2 1151 aaKnown RBP13.26□□□□□ -0.29
LINC00339-213ENST00000642137 GRPEL1Q9HAV7 217 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 DNAJB4Q9UDY4 337 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 PCDHA11Q9Y5I1 949 aa13.26□□□□□ -0.29
LINC00339-213ENST00000642137 A0A1W2PQC6 194 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 B4GALT3O60512 393 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
LINC00339-213ENST00000642137 LAG3P18627 525 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 SLC9A1P19634 815 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 PON1P27169 355 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 PIK3CAP42336 1068 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 SLC11A1P49279 550 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 TAF6P49848 677 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 MRE11P49959 708 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 BCAR1P56945 870 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 LILRA4P59901 499 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 SPOUT1Q5T280 376 aaKnown RBP13.25□□□□□ -0.29
LINC00339-213ENST00000642137 CD300LGQ6UXG3 332 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 TMEM130Q8N3G9 435 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 CLP1Q92989 425 aaKnown RBP13.25□□□□□ -0.29
LINC00339-213ENST00000642137 HPDLQ96IR7 371 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 PAAF1Q9BRP4 392 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 XYLT2Q9H1B5 865 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 MRPL42Q9Y6G3 142 aaKnown RBP13.25□□□□□ -0.29
LINC00339-213ENST00000642137 SCN1AP35498 2009 aa13.25□□□□□ -0.29
LINC00339-213ENST00000642137 GRXCR1A8MXD5 290 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 PPEF2O14830 753 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 LRRN2O75325 713 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 B3GAT3O94766 335 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 FAM163BP0C2L3 166 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 PBX1P40424 430 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 RABGGTBP53611 331 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 SYCP1Q15431 976 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 SV2CQ496J9 727 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 FAM109BQ6ICB4 259 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-213ENST00000642137 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 COLGALT1Q8NBJ5 622 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 TATDN2Q93075 761 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 ZNF558Q96NG5 402 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 INTS2Q9H0H0 1204 aaKnown RBP13.24□□□□□ -0.29
LINC00339-213ENST00000642137 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 GCNT4Q9P109 453 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 CACNG4Q9UBN1 327 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 MSRAQ9UJ68 235 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 RWDD3Q9Y3V2 267 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 DAAM1Q9Y4D1 1078 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 PCDHB12Q9Y5F1 795 aa13.24□□□□□ -0.29
LINC00339-213ENST00000642137 A0A1W2PPC1 479 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 TRAPPC3O43617 180 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 TADA2AO75478 443 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 BMPR1AP36894 532 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 AARSP49588 968 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC00339-213ENST00000642137 ZNF75DP51815 510 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 RAB30Q15771 203 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 TRIM65Q6PJ69 517 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 C3orf58Q8NDZ4 430 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 RABGGTAQ92696 567 aa13.23□□□□□ -0.29
LINC00339-213ENST00000642137 MRFAP1L1Q96HT8 127 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms