RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GRK7Q8WTQ7 553 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 PRCCQ92733 491 aaPredicted RBP14.7□□□□□ -0.06
PHGDH-233ENST00000642021 KLHL11Q9NVR0 708 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 EURLQ9NYK6 297 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 PGAP2Q9UHJ9 254 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 USTQ9Y2C2 406 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 PTPRJQ12913 1337 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 LOXHD1Q8IVV2 1947 aa14.7□□□□□ -0.06
PHGDH-233ENST00000642021 CFAP73A6NFT4 308 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 STBD1O95210 358 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 RPSAP08865 295 aaKnown RBP14.69□□□□□ -0.06
PHGDH-233ENST00000642021 EZRP15311 586 aaKnown RBP14.69□□□□□ -0.06
PHGDH-233ENST00000642021 TCF4P15884 667 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 ELF1P32519 619 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 CENPCQ03188 943 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 CCNG2Q16589 344 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 CYP4F22Q6NT55 531 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 N4BP2L2Q92802 583 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-233ENST00000642021 OSBPL8Q9BZF1 889 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 SLC38A10Q9HBR0 1119 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 XPNPEP1Q9NQW7 623 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 TCEAL9Q9UHQ7 104 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 ASNSP08243 561 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 KRT16P08779 473 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 ATP5DP30049 168 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 STX2P32856 288 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 NF2P35240 595 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 JAK3P52333 1124 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 WDR4P57081 412 aaKnown RBP14.69□□□□□ -0.06
PHGDH-233ENST00000642021 COPS2P61201 443 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 MAMLD1Q13495 774 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 RIPK1Q13546 671 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 HP1BP3Q5SSJ5 553 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-233ENST00000642021 TLDC1Q6P9B6 456 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 ZNF365Q70YC5 407 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 SLC17A8Q8NDX2 589 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 AGAP11Q8TF27 550 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 SPIRE2Q8WWL2 714 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 CNKSR1Q969H4 720 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 FHDC1Q9C0D6 1143 aaPredicted RBP14.69□□□□□ -0.06
PHGDH-233ENST00000642021 C1orf112Q9NSG2 853 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 LGALS13Q9UHV8 139 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 ARL2BPQ9Y2Y0 163 aa14.69□□□□□ -0.06
PHGDH-233ENST00000642021 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.69□□□□□ -0.06
PHGDH-233ENST00000642021 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 KRT10P13645 584 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 TAC1P20366 129 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 ACO1P21399 889 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 KLRC2P26717 231 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 MAN1A1P33908 653 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 CAV1Q03135 178 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 TDRD10Q5VZ19 366 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 OGFOD1Q8N543 542 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 SAMD3Q8N6K7 520 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 MAIP1Q8WWC4 291 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 MAML1Q92585 1016 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 WNK4Q96J92 1243 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 FAM81BQ96LP2 452 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 MOV10L1Q9BXT6 1211 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 APOBEC3GQ9HC16 384 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 PXMP2Q9NR77 195 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 PI4K2BG5E9Z4 385 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 CDH16O75309 829 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 VNN1O95497 513 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 HLA-DRAP01903 254 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 GCAP28676 217 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 SSR1P43307 286 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 ACOT2P49753 483 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 KRT76Q01546 638 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 SP4Q02446 784 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 P3H1Q32P28 736 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 ENOSF1Q7L5Y1 443 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 RPAINQ86UA6 219 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 KLHL29Q96CT2 875 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 THOC1Q96FV9 657 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 BICD1Q96G01 975 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 RBM15Q96T37 977 aaKnown RBP eCLIP14.68□□□□□ -0.064e-7■■■□□ 17.3
PHGDH-233ENST00000642021 RIPK3Q9Y572 518 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 PCDHA10Q9Y5I2 948 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 C4BPAP04003 597 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 ETS1P14921 441 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 TNNI1P19237 187 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 SFNP31947 248 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 MAGEA4P43358 317 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 NLRP11P59045 1033 aaKnown RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 PTP4A2Q12974 167 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 ZACNQ401N2 412 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 BRDTQ58F21 947 aaPredicted RBP14.68□□□□□ -0.06
PHGDH-233ENST00000642021 FAM47EQ6ZV65 393 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 RHOT1Q8IXI2 618 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 KIRREL3Q8IZU9 778 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 CCDC89Q8N998 374 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 MAGEB18Q96M61 343 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 PDLIM7Q9NR12 457 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 ADAM22Q9P0K1 906 aa14.68□□□□□ -0.06
PHGDH-233ENST00000642021 RASA4BC9J798 803 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 RASA4O43374 803 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 SPAG7O75391 227 aa14.67□□□□□ -0.06
PHGDH-233ENST00000642021 MYBL1P10243 752 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms