RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 MAPK7Q13164 816 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 DHX8Q14562 1220 aaKnown RBP8.14□□□□□ -1.11
PHGDH-225ENST00000641720 MCM6Q14566 821 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 SLC5A9Q2M3M2 681 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 ADALQ6DHV7 355 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 FUT10Q6P4F1 479 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 CLEC17AQ6ZS10 378 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 OTUD6AQ7L8S5 288 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 GRASPQ7Z6J2 395 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-225ENST00000641720 GPBP1Q86WP2 473 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 PALB2Q86YC2 1186 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 DAW1Q8N136 415 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 FSIP1Q8NA03 581 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 NETO1Q8TDF5 533 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 ASAP3Q8TDY4 903 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 SLC7A3Q8WY07 619 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 BSNDQ8WZ55 320 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 LARP4BQ92615 738 aaKnown RBP8.14□□□□□ -1.11
PHGDH-225ENST00000641720 DHX58Q96C10 678 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 ZFP42Q96MM3 310 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 GAD1Q99259 594 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 CLSTN3Q9BQT9 956 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 BCO2Q9BYV7 579 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 POLR3FQ9H1D9 316 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-225ENST00000641720 CXCL16Q9H2A7 254 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 POLD4Q9HCU8 107 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 RXFP3Q9NSD7 469 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 HCFC1R1Q9NWW0 138 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 C2orf42Q9NWW7 574 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 DNM3Q9UQ16 869 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 PPME1Q9Y570 386 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 IPPQ9Y573 584 aa8.14□□□□□ -1.11
PHGDH-225ENST00000641720 K7ESF4 209 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 ARNTLO00327 626 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 POLR2DO15514 142 aaKnown RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 ACTN4O43707 911 aaKnown RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 GAS2O43903 313 aaKnown RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 DGAT1O75907 488 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 XRCC6P12956 609 aaKnown RBP eCLIP8.13□□□□□ -1.115e-6■■□□□ 11.5
PHGDH-225ENST00000641720 CYP11B2P19099 503 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 CMA1P23946 247 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 MLH1P40692 756 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 SCNN1GP51170 649 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 CACNB1Q02641 598 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 RNASELQ05823 741 aaKnown RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 RAD51AP2Q09MP3 1159 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 UBXN2BQ14CS0 331 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 ARSHQ5FYA8 562 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 RRAGBQ5VZM2 374 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 RINT1Q6NUQ1 792 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 PRSS55Q6UWB4 352 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 CD300LGQ6UXG3 332 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 PRR23CQ6ZRP0 262 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 C1orf186Q6ZWK4 172 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 MAEAQ7L5Y9 396 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 CATSPER4Q7RTX7 472 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 RHPN2Q8IUC4 686 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 GRAMD1CQ8IYS0 662 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 SYT2Q8N9I0 419 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 LNX1Q8TBB1 728 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 PIK3R5Q8WYR1 880 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 SHDQ96IW2 340 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 MTRQ99707 1265 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 KXD1Q9BQD3 176 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 FAM126AQ9BYI3 521 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 KANSL3Q9P2N6 904 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 SUCLA2Q9P2R7 463 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 DNMT3BQ9UBC3 853 aaKnown RBP8.13□□□□□ -1.11
PHGDH-225ENST00000641720 STK17AQ9UEE5 414 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 KCNH3Q9ULD8 1083 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 USP18Q9UMW8 372 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 SSX2IPQ9Y2D8 614 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 HES2Q9Y543 173 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 NAV2Q8IVL1 2488 aa8.13□□□□□ -1.11
PHGDH-225ENST00000641720 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 MYOFQ9NZM1 2061 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 HRO43593 1189 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 TSPAN1O60635 241 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 HIP1RO75146 1068 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 ECI2O75521 394 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 PAPSS2O95340 614 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 RETP07949 1114 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 HNRNPA1P09651 372 aaKnown RBP eCLIP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 LIG1P18858 919 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 GLRA2P23416 452 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 GUCY2CP25092 1073 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 ARL2P36404 184 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 LIMK1P53667 647 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 CDC42EP1Q00587 391 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 LAMTOR4Q0VGL1 99 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 CAPSQ13938 189 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 CSRP2Q16527 193 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 PRSS36Q5K4E3 855 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 ZBTB41Q5SVQ8 909 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 N4BP2L1Q5TBK1 243 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-225ENST00000641720 LAIR1Q6GTX8 287 aa8.12□□□□□ -1.11
PHGDH-225ENST00000641720 CCDC73Q6ZRK6 1079 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms