RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 THPOP40225 353 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 YARSP54577 528 aaKnown RBP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 NOP14P78316 857 aaKnown RBP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 TMEM132DQ14C87 1099 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 PTGISQ16647 500 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 LONRF2Q1L5Z9 754 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 BEND6Q5SZJ8 279 aaPredicted RBP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 MAP3K21Q5TCX8 1036 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 JADE1Q6IE81 842 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 HDXQ7Z353 690 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 EFCAB13Q8IY85 973 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 RPUSD2Q8IZ73 545 aaKnown RBP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 SLC20A1Q8WUM9 679 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 DHX38Q92620 1227 aaKnown RBP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 SECISBP2LQ93073 1101 aaKnown RBP9.5□□□□□ -0.89
PHGDH-219ENST00000641513 LACRTQ9GZZ8 138 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 SNTG2Q9NY99 539 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 PSD3Q9NYI0 1048 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 RNF14Q9UBS8 474 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 JRKLQ9Y4A0 524 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 PCDHB4Q9Y5E5 795 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 SAR1BQ9Y6B6 198 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 PTCH2Q9Y6C5 1203 aa9.5□□□□□ -0.89
PHGDH-219ENST00000641513 BTNL10A8MVZ5 291 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 B4GALT4O60513 344 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 TACC1O75410 805 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 CABYRO75952 493 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 MOCS3O95396 460 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 H2AFZP0C0S5 128 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 TCP1P17987 556 aaKnown RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 TBXAS1P24557 533 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 CST5P28325 142 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 HOXC8P31273 242 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 GRM5P41594 1212 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 PDE6CP51160 858 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 ACLYP53396 1101 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 MYL6P60660 151 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 NKX3-2P78367 333 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 GCNT1Q02742 428 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 CUL2Q13617 745 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 ITGA7Q13683 1181 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 NAB2Q15742 525 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 SGSM1Q2NKQ1 1148 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 ZNF699Q32M78 642 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 SLC10A6Q3KNW5 377 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 C10orf76Q5T2E6 689 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 TWF2Q6IBS0 349 aaKnown RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 ALKBH5Q6P6C2 394 aaKnown RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 SCARA5Q6ZMJ2 495 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 H2AFVQ71UI9 128 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 GLYCTKQ8IVS8 523 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 FAM71AQ8IYT1 594 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 LNX1Q8TBB1 728 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 SH3TC2Q8TF17 1288 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 TMEM40Q8WWA1 233 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 SHC3Q92529 594 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 KIF12Q96FN5 646 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 GLT1D1Q96MS3 346 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 ALS2CR12Q96Q35 445 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 ARID3AQ99856 593 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 EIF2AQ9BY44 585 aaKnown RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 APOBEC3GQ9HC16 384 aaKnown RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
PHGDH-219ENST00000641513 PARP2Q9UGN5 583 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 L1RE1Q9UN81 338 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 NUB1Q9Y5A7 615 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 DUSP10Q9Y6W6 482 aa9.49□□□□□ -0.89
PHGDH-219ENST00000641513 KBTBD13C9JR72 458 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 DDX3XO00571 662 aaKnown RBP eCLIP9.48□□□□□ -0.897e-18■■■□□ 16.8
PHGDH-219ENST00000641513 BUB1O43683 1085 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 RPS6KA5O75582 802 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 CST3P01034 146 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 ITGB3P05106 788 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 CD58P19256 250 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 IBSPP21815 317 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 HOXA11P31270 313 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 NOP2P46087 812 aaKnown RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 BPIFB4P59827 614 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 POU5F1Q01860 360 aaKnown RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 ZNF667Q5HYK9 610 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 CCSAPQ6IQ19 270 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 CCDC70Q6NSX1 233 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 NOP9Q86U38 636 aaKnown RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 SERINC5Q86VE9 423 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 SLC47A2Q86VL8 602 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 DNAAF5Q86Y56 855 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 CD302Q8IX05 232 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 ARRDC4Q8NCT1 418 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 PACSIN1Q9BY11 444 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 NXF3Q9H4D5 531 aaKnown RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 ASB7Q9H672 318 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 MED4Q9NPJ6 270 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 DPP3Q9NY33 737 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 AGAP1Q9UPQ3 857 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 NOC2LQ9Y3T9 749 aaKnown RBP9.48□□□□□ -0.89
PHGDH-219ENST00000641513 HES2Q9Y543 173 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms