RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 P4HA1P13674 534 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 SLC9A1P19634 815 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 ZNF667Q5HYK9 610 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 FIBCD1Q8N539 461 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 NXF1Q9UBU9 619 aaKnown RBP12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 FAN1Q9Y2M0 1017 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 AP5Z1O43299 807 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 DDHD2O94830 711 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 VNN1O95497 513 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 TPM1P09493 284 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 LRPAP1P30533 357 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 ATICP31939 592 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 TAF6P49848 677 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 CLCNKBP51801 687 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 PTPN21Q16825 1174 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 WDR72Q3MJ13 1102 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 EPC2Q52LR7 807 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 MRFAP1L1Q96HT8 127 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 COLEC11Q9BWP8 271 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 SIX4Q9UIU6 781 aa12.76□□□□□ -0.37
KCNMA1-289ENST00000640807 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 PON1P27169 355 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 TRIM65Q6PJ69 517 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 TAF4BQ92750 862 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 TNNC1P63316 161 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 DSC1Q08554 894 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 SV2CQ496J9 727 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 ZNF689Q96CS4 500 aaPredicted RBP12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 MMS19Q96T76 1030 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 DNAJB4Q9UDY4 337 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 ANK1P16157 1881 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 TADA2AO75478 443 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 NAB2Q15742 525 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 CACNA2D4Q7Z3S7 1137 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 COLGALT2Q8IYK4 626 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 TMEM130Q8N3G9 435 aa12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.75□□□□□ -0.37
KCNMA1-289ENST00000640807 ANO9A1A5B4 782 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 GOLGA6L6A8MZA4 724 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 PIRO00625 290 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 ASS1P00966 412 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 UPP1Q16831 310 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 RASIP1Q5U651 963 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 SPECC1LQ69YQ0 1117 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 TMC6Q7Z403 805 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 ZNF558Q96NG5 402 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 TMEM175Q9BSA9 504 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 SNX9Q9Y5X1 595 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 TDRD15B5MCY1 1934 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 PPEF2O14830 753 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 TRAPPC3O43617 180 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 LAG3P18627 525 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 HTRA4P83105 476 aaPredicted RBP12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 KCNMA1Q12791 1236 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 SPOPLQ6IQ16 392 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 HASPINQ8TF76 798 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 APEX2Q9UBZ4 518 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
KCNMA1-289ENST00000640807 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 NRP1O14786 923 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 BCAR1P56945 870 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 LILRA4P59901 499 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 FAM81BQ96LP2 452 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 PLCB1Q9NQ66 1216 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 SIK3Q9Y2K2 1263 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 PCDHB12Q9Y5F1 795 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 ARHGEF37A1IGU5 675 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 NT5C1B-RDH14C9J2C7 533 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 HUS1O60921 280 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 LRRN2O75325 713 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 GALTP07902 379 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 PAX3P23760 479 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 SLC11A1P49279 550 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 KLK7P49862 253 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 RABGGTBP53611 331 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 RAPGEF1Q13905 1077 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 RRAGAQ7L523 313 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 VSTM4Q8IW00 320 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 SPAG5Q96R06 1193 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 NIF3L1Q9GZT8 377 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms