RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 MPP4Q96JB8 637 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 MRPS26Q9BYN8 205 aaKnown RBP5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 KIAA1683Q9H0B3 1180 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 SMYD3Q9H7B4 428 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 KANSL2Q9H9L4 492 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 NMRK1Q9NWW6 199 aa5.29□□□□□ -1.56
HNRNPU-230ENST00000640657 TMEM94Q12767 1356 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 A6NHS1 94 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 F8W031 263 aaPredicted RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 H3BRJ5 948 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 GIPC1O14908 333 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 TGDSO95455 350 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ZCCHC18P0CG32 403 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 KCNA4P22459 653 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 EEF1DP29692 281 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 TTKP33981 857 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PRELPP51888 382 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CHN2P52757 468 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 EPHB1P54762 984 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 BASP1P80723 227 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CYP4A11Q02928 519 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 FUT2Q10981 343 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 LIN52Q52LA3 116 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PRPF39Q86UA1 669 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 TMEM35BQ8NCS4 154 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 SCFD1Q8WVM8 642 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PNMA5Q96PV4 448 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ECSITQ9BQ95 431 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 TMEM120AQ9BXJ8 343 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 STN1Q9H668 368 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 TMEM260Q9NX78 707 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ARHGAP26Q9UNA1 814 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 FRMPD4Q14CM0 1322 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 RSPH10B2B2RC85 870 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 NMT2O60551 498 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ZC3H11AO75152 810 aaKnown RBP eCLIP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 GPC4O75487 556 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 LDHAP00338 332 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 RSPH10BP0C881 870 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 MYL4P12829 197 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CNTFP26441 200 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 GTF2H1P32780 548 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PIK3CAP42336 1068 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 MAGEA8P43361 318 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 KCNJ1P48048 391 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 KIF22Q14807 665 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 NKX1-1Q15270 411 aaPredicted RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 IL17AQ16552 155 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 C1orf228Q6PIY5 440 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 C4orf50Q6ZRC1 276 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF554Q86TJ5 538 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 TDRPQ86YL5 185 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 EXD1Q8NHP7 514 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PRPF31Q8WWY3 499 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 POMGNT1Q8WZA1 660 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 SEC14L1Q92503 715 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 SDCCAG3Q96C92 435 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 DYNLL2Q96FJ2 89 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF570Q96NI8 536 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CCT7Q99832 543 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 RIOK1Q9BRS2 568 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 DCLK3Q9C098 648 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PLGRKTQ9HBL7 147 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PRM3Q9NNZ6 103 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 AVENQ9NQS1 362 aaPredicted RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 OLFML3Q9NRN5 406 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 BLOC1S4Q9NUP1 217 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 SCHIP1Q9P0W5 487 aaPredicted RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PNMA3Q9UL41 463 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 EMSYQ7Z589 1322 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ROBO3Q96MS0 1386 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 MEIS1O00470 390 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ADCY3O60266 1144 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 H2AFYO75367 372 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 HSPA4LO95757 839 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 FAM58BPP0C7Q3 252 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CYP2D6P10635 497 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 KRT4P19013 534 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 HMOX2P30519 316 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 LIG4P49917 911 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CDK7P50613 346 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 AP3M2P53677 418 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 KDSRQ06136 332 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PPIDQ08752 370 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PIGHQ14442 188 aaPredicted RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 UBE2SQ16763 222 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 GALNTL6Q49A17 601 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 SUSD4Q5VX71 490 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 SLFN12LQ6IEE8 588 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CASC4Q6P4E1 433 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF34Q8IZ26 560 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 LRRC47Q8N1G4 583 aaKnown RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 FITM2Q8N6M3 262 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 C12orf50Q8NA57 414 aaPredicted RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 FBXL13Q8NEE6 735 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 DEPDC1BQ8WUY9 529 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 PBXIP1Q96AQ6 731 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 CCDC127Q96BQ5 260 aa5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 OXNAD1Q96HP4 312 aaPredicted RBP5.28□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF333Q96JL9 665 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms