RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 AGAP1Q9UPQ3 857 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 LZTS1Q9Y250 596 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 NUB1Q9Y5A7 615 aa14.26□□□□□ -0.13
GTF3A-209ENST00000640289 LAMA2P24043 3122 aaKnown RBP14.26□□□□□ -0.13
GTF3A-209ENST00000640289 CITO14578 2027 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 ANK1P16157 1881 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 SPTLC1O15269 473 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 C4BPAP04003 597 aaKnown RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 SOD2P04179 222 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 IGFBP4P22692 258 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 GCLMP48507 274 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 UBE3AQ05086 875 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 PPP3CAQ08209 521 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 TPD52L1Q16890 204 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 TIGD5Q53EQ6 642 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 HSP90AA4PQ58FG1 418 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 DCAF17Q5H9S7 520 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 CT47A1Q5JQC4 288 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 TCERG1LQ5VWI1 586 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 TDRD10Q5VZ19 366 aaKnown RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 PLPP4Q5VZY2 271 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 GAS2L1Q99501 681 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 TCF25Q9BQ70 676 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 HERC2P3Q9BVR0 1158 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 ZBP1Q9H171 429 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 TLR9Q9NR96 1032 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 ARMCX3Q9UH62 379 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 PUF60Q9UHX1 559 aaKnown RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 ITGA11Q9UKX5 1188 aa14.25□□□□□ -0.13
GTF3A-209ENST00000640289 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 COL4A4P53420 1690 aaPredicted RBP14.25□□□□□ -0.13
GTF3A-209ENST00000640289 SF3B1O75533 1304 aaKnown RBP eCLIP14.24□□□□□ -0.131e-6■■■■■ 64.6
GTF3A-209ENST00000640289 TRIP11Q15643 1979 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 IKBKBO14920 756 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 FSCN2O14926 492 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 CA8P35219 290 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 LILRA4P59901 499 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
GTF3A-209ENST00000640289 RBP5P82980 135 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 BIRC3Q13489 604 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 FAM171A1Q5VUB5 890 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 TMC7Q7Z402 723 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 FRMD5Q7Z6J6 570 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 CEP57Q86XR8 500 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 IRF2BP1Q8IU81 584 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 CREBRFQ8IUR6 639 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 MICAL1Q8TDZ2 1067 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 ELMO3Q96BJ8 720 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 MRPL38Q96DV4 380 aaKnown RBP14.24□□□□□ -0.13
GTF3A-209ENST00000640289 LMAN2LQ9H0V9 348 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 METTL14Q9HCE5 456 aaKnown RBP14.24□□□□□ -0.13
GTF3A-209ENST00000640289 ENTPD7Q9NQZ7 604 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
GTF3A-209ENST00000640289 MTCH2Q9Y6C9 303 aa14.24□□□□□ -0.13
GTF3A-209ENST00000640289 PDCD11Q14690 1871 aaKnown RBP14.24□□□□□ -0.13
GTF3A-209ENST00000640289 PLXNA4Q9HCM2 1894 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 HIDE1A8MVS5 230 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 C2CD2LO14523 706 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 PHACTR2O75167 634 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 VNN1O95497 513 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 FGFR1OPO95684 399 aaKnown RBP14.23□□□□□ -0.13
GTF3A-209ENST00000640289 TKTP29401 623 aaKnown RBP14.23□□□□□ -0.13
GTF3A-209ENST00000640289 AARSP49588 968 aaKnown RBP eCLIP14.23□□□□□ -0.13
GTF3A-209ENST00000640289 TAF6P49848 677 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 AP3M2P53677 418 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 ENPEPQ07075 957 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 PTPROQ16827 1216 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 ZACNQ401N2 412 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 RTP2Q5QGT7 225 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 C15orf39Q6ZRI6 1047 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 SV2AQ7L0J3 742 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 ADGRD2Q7Z7M1 963 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 USP37Q86T82 979 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 ENOX1Q8TC92 643 aaKnown RBP14.23□□□□□ -0.13
GTF3A-209ENST00000640289 SUSD3Q96L08 255 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 CNOT6LQ96LI5 555 aaKnown RBP14.23□□□□□ -0.13
GTF3A-209ENST00000640289 CHST7Q9NS84 486 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 NFE2L3Q9Y4A8 694 aa14.23□□□□□ -0.13
GTF3A-209ENST00000640289 CHD9Q3L8U1 2897 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 M0QZQ0 153 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 TRAPPC3O43617 180 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 LRRN2O75325 713 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 CXCL14O95715 111 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 GNA14O95837 355 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 CTSAP10619 480 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 FOSL2P15408 326 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 GLUD2P49448 558 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 MARSP56192 900 aaKnown RBP14.22□□□□□ -0.13
GTF3A-209ENST00000640289 MYL6P60660 151 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 DSG1Q02413 1049 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 ELAVL2Q12926 359 aaKnown RBP14.22□□□□□ -0.13
GTF3A-209ENST00000640289 TRPC3Q13507 836 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 PTPN14Q15678 1187 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 USP41Q3LFD5 358 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 CBWD6Q4V339 395 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 CBWD3Q5JTY5 395 aa14.22□□□□□ -0.13
GTF3A-209ENST00000640289 CBWD5Q5RIA9 395 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms