RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PTPN21Q16825 1174 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 DACT2Q5SW24 774 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 PNKPQ96T60 521 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 TBCCD1Q9NVR7 557 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 CDYLQ9Y232 598 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 IPPQ9Y573 584 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 ESRRBO95718 433 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 CD1AP06126 327 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 MPLP40238 635 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 CLK3P49761 638 aaKnown RBP6.41□□□□□ -1.38
CCDC7-216ENST00000640058 BLOC1S1P78537 153 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 ODF1Q14990 250 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 UTP14CQ5TAP6 766 aaKnown RBP6.41□□□□□ -1.38
CCDC7-216ENST00000640058 GADL1Q6ZQY3 521 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 FAM43AQ8N2R8 423 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 NLGN4YQ8NFZ3 816 aaPredicted RBP6.41□□□□□ -1.38
CCDC7-216ENST00000640058 COA7Q96BR5 231 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 BOD1Q96IK1 185 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 CLPTM1LQ96KA5 538 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 UNKLQ9H9P5 680 aaKnown RBP6.41□□□□□ -1.38
CCDC7-216ENST00000640058 TMEM74BQ9NUR3 256 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 SALL3Q9BXA9 1300 aa6.41□□□□□ -1.38
CCDC7-216ENST00000640058 MTHFD1P11586 935 aaKnown RBP6.4□□□□□ -1.38
CCDC7-216ENST00000640058 PTH2RP49190 550 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 VAV2P52735 878 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 FLYWCH1Q4VC44 716 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 PABPC1LQ4VXU2 614 aaKnown RBP6.4□□□□□ -1.38
CCDC7-216ENST00000640058 STRIP1Q5VSL9 837 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 EFCAB2Q5VUJ9 269 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 DPY19L2P1Q6NXN4 242 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 PTCD3Q96EY7 689 aaKnown RBP6.4□□□□□ -1.38
CCDC7-216ENST00000640058 PACSIN1Q9BY11 444 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 SLC45A2Q9UMX9 530 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 PCDHB1Q9Y5F3 818 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 COL4A3BPQ9Y5P4 624 aa6.4□□□□□ -1.38
CCDC7-216ENST00000640058 TNKSO95271 1327 aa6.4□□□□□ -1.39
CCDC7-216ENST00000640058 ALG1L2C9J202 215 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 CCND1P24385 295 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 Q6ZNX1 250 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 ZNF575Q86XF7 245 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 TMEM125Q96AQ2 219 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 MRGPRX4Q96LA9 322 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.39□□□□□ -1.39
CCDC7-216ENST00000640058 MAST3O60307 1309 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 WASHC2CQ9Y4E1 1318 aa6.39□□□□□ -1.39
CCDC7-216ENST00000640058 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 SGTAO43765 313 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 TLE1Q04724 770 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 COLGALT2Q8IYK4 626 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 NSUN7Q8NE18 718 aaKnown RBP6.38□□□□□ -1.39
CCDC7-216ENST00000640058 SSH3Q8TE77 659 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 KLHL32Q96NJ5 620 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 MED15Q96RN5 788 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 VRK1Q99986 396 aaPredicted RBP6.38□□□□□ -1.39
CCDC7-216ENST00000640058 AIFM2Q9BRQ8 373 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 PRDM13Q9H4Q3 707 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 PCDH12Q9NPG4 1184 aa6.38□□□□□ -1.39
CCDC7-216ENST00000640058 VSX1Q9NZR4 365 aaPredicted RBP6.38□□□□□ -1.39
CCDC7-216ENST00000640058 RAB39AQ14964 217 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 ERCC6LQ2NKX8 1250 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 PRR16Q569H4 304 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 ADGRG3Q86Y34 549 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 Q8NA96 180 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 SIMC1Q8NDZ2 872 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 TMIEQ8NEW7 156 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 FUBP1Q96AE4 644 aaKnown RBP6.37□□□□□ -1.39
CCDC7-216ENST00000640058 DMRTA2Q96SC8 542 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 ASPSCR1Q9BZE9 553 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 IMPG2Q9BZV3 1241 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 RSAD1Q9HA92 442 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 JKAMPQ9P055 326 aa6.37□□□□□ -1.39
CCDC7-216ENST00000640058 LRRC14BA6NHZ5 514 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 KRT85P78386 507 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 MRPS35P82673 323 aaKnown RBP6.36□□□□□ -1.39
CCDC7-216ENST00000640058 SF3B3Q15393 1217 aaKnown RBP6.36□□□□□ -1.39
CCDC7-216ENST00000640058 KHDC1Q4VXA5 237 aaKnown RBP6.36□□□□□ -1.39
CCDC7-216ENST00000640058 ZNF365Q70YC5 407 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 SLC17A8Q8NDX2 589 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 IL17RDQ8NFM7 739 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 ACTRT2Q8TDY3 377 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 BBC3Q96PG8 261 aaPredicted RBP6.36□□□□□ -1.39
CCDC7-216ENST00000640058 R3HDMLQ9H3Y0 253 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 KIAA1586Q9HCI6 787 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 KCTD5Q9NXV2 234 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 PTGFRNQ9P2B2 879 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 LRIT1Q9P2V4 623 aa6.36□□□□□ -1.39
CCDC7-216ENST00000640058 SPATA31A6Q5VVP1 1343 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 MYADML2A6NDP7 307 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 MGST3O14880 152 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 SLC43A1O75387 559 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 ZRANB2O95218 330 aaKnown RBP eCLIP6.35□□□□□ -1.39
CCDC7-216ENST00000640058 ADKP55263 362 aaKnown RBP6.35□□□□□ -1.39
CCDC7-216ENST00000640058 CD300EQ496F6 205 aaPredicted RBP6.35□□□□□ -1.39
CCDC7-216ENST00000640058 RD3Q7Z3Z2 195 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 TLK1Q9UKI8 766 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 DMTF1Q9Y222 760 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 INSL6Q9Y581 213 aa6.35□□□□□ -1.39
CCDC7-216ENST00000640058 TOR1BO14657 336 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 KCNA2P16389 499 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms