RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 FKTNO75072 461 aa23.25■■□□□ 1.31
SCARB2-212ENST00000638663 RTN2O75298 545 aa23.25■■□□□ 1.31
SCARB2-212ENST00000638663 GUCY2FP51841 1108 aa23.25■■□□□ 1.31
SCARB2-212ENST00000638663 SCARA5Q6ZMJ2 495 aa23.25■■□□□ 1.31
SCARB2-212ENST00000638663 PCSK9Q8NBP7 692 aaKnown RBP23.25■■□□□ 1.31
SCARB2-212ENST00000638663 RBBP8NLQ8NC74 664 aaPredicted RBP23.25■■□□□ 1.31
SCARB2-212ENST00000638663 ZNF296Q8WUU4 475 aaPredicted RBP23.25■■□□□ 1.31
SCARB2-212ENST00000638663 CDY2AQ9Y6F7 541 aa23.25■■□□□ 1.31
SCARB2-212ENST00000638663 NCK2O43639 380 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 CD58P19256 250 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 RSPH3Q86UC2 560 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 UBR7Q8N806 425 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 ARHGEF26Q96DR7 871 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 KIF12Q96FN5 646 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 CXCL16Q9H2A7 254 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 NXF3Q9H4D5 531 aaKnown RBP23.24■■□□□ 1.31
SCARB2-212ENST00000638663 NXF1Q9UBU9 619 aaKnown RBP23.24■■□□□ 1.31
SCARB2-212ENST00000638663 CNTN6Q9UQ52 1028 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 NOC2LQ9Y3T9 749 aaKnown RBP23.24■■□□□ 1.31
SCARB2-212ENST00000638663 C2CD2Q9Y426 696 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 NCANO14594 1321 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 GRIN2DO15399 1336 aa23.24■■□□□ 1.31
SCARB2-212ENST00000638663 FTCDO95954 541 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 CTSHP09668 335 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 GZMAP12544 262 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 IFI16Q16666 785 aaKnown RBP23.23■■□□□ 1.31
SCARB2-212ENST00000638663 WHAMMP3Q1A5X7 153 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 SERINC5Q86VE9 423 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 CD302Q8IX05 232 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 CXorf38Q8TB03 319 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 APOL6Q9BWW8 343 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 PUF60Q9UHX1 559 aaKnown RBP23.23■■□□□ 1.31
SCARB2-212ENST00000638663 POLIQ9UNA4 740 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 TRPV2Q9Y5S1 764 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 CITO14578 2027 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 INHAP05111 366 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 WEE2P0C1S8 567 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 ASPAP45381 313 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 YARSP54577 528 aaKnown RBP23.23■■□□□ 1.31
SCARB2-212ENST00000638663 RNF180Q86T96 592 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 FAM228AQ86W67 206 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 TPCN2Q8NHX9 752 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 SLC35G2Q8TBE7 412 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 RFFLQ8WZ73 363 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 TAF4BQ92750 862 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 SNX27Q96L92 541 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 PLEKHA5Q9HAU0 1116 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 SNX12Q9UMY4 172 aa23.23■■□□□ 1.31
SCARB2-212ENST00000638663 TADA3O75528 432 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 GNA15P30679 374 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 POLR2BP30876 1174 aaKnown RBP23.22■■□□□ 1.31
SCARB2-212ENST00000638663 WDR72Q3MJ13 1102 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 ZNF667Q5HYK9 610 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 SESTD1Q86VW0 696 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 ZNF677Q86XU0 584 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 TLR10Q9BXR5 811 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 OSGEPQ9NPF4 335 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 CISHQ9NSE2 258 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 DPP3Q9NY33 737 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 HTTP42858 3142 aa23.22■■□□□ 1.31
SCARB2-212ENST00000638663 AKAP5P24588 427 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 PTGISQ16647 500 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 UBXN11Q5T124 520 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 NT5DC4Q86YG4 428 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 CEP112Q8N8E3 955 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 GOLPH3Q9H4A6 298 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 AGAP1Q9UPQ3 857 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 RECQL4O94761 1208 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 ZNF132P52740 706 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 CLEC16AQ2KHT3 1053 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 ERCC6LQ2NKX8 1250 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 LRRC57Q8N9N7 239 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 CAPZA3Q96KX2 299 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 ZMAT2Q96NC0 199 aaKnown RBP23.21■■□□□ 1.31
SCARB2-212ENST00000638663 PSMB7Q99436 277 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 PDCL3Q9H2J4 239 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 ITGA11Q9UKX5 1188 aa23.21■■□□□ 1.31
SCARB2-212ENST00000638663 ZNF185O15231 689 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 CHRNA1P02708 482 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 ACLYP53396 1101 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 GPC5P78333 572 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 ARHGEF6Q15052 776 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 ZNF394Q53GI3 561 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 RNF19AQ9NV58 838 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 EFCAB8A8MWE9 144 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 THAP12O43422 761 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 ATICP31939 592 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 RAP1GAPP47736 663 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 ITGA7Q13683 1181 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 ELF2Q15723 593 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 MEI1Q5TIA1 1274 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 TWF2Q6IBS0 349 aaKnown RBP23.2■■□□□ 1.3
SCARB2-212ENST00000638663 ACAD10Q6JQN1 1059 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 SLAIN1Q8ND83 568 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 HPDLQ96IR7 371 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 SENP6Q9GZR1 1112 aaPredicted RBP23.2■■□□□ 1.3
SCARB2-212ENST00000638663 RNF39Q9H2S5 420 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 PACSIN2Q9UNF0 486 aaPredicted RBP23.2■■□□□ 1.3
SCARB2-212ENST00000638663 HYOU1Q9Y4L1 999 aa23.2■■□□□ 1.3
SCARB2-212ENST00000638663 RPS6KA5O75582 802 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms