RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZBTB10Q96DT7 871 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 NLRP4Q96MN2 994 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 JPH2Q9BR39 696 aaPredicted RBP22.95■■□□□ 1.26
CLN6-224ENST00000638076 C11orf70Q9BRQ4 267 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 EFCC1Q9HA90 598 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 CPSF3Q9UKF6 684 aaKnown RBP22.95■■□□□ 1.26
CLN6-224ENST00000638076 SNX24Q9Y343 169 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 NFS1Q9Y697 457 aa22.95■■□□□ 1.26
CLN6-224ENST00000638076 ASS1P00966 412 aaKnown RBP22.94■■□□□ 1.26
CLN6-224ENST00000638076 RARAP10276 462 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 TTLL4Q14679 1199 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 SIX1Q15475 284 aaPredicted RBP22.94■■□□□ 1.26
CLN6-224ENST00000638076 CYP1B1Q16678 543 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 CAPS2Q9BXY5 557 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 ZDHHC18Q9NUE0 388 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 ADAM22Q9P0K1 906 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 MCM3APO60318 1980 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 POTEJP0CG39 1038 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 CYP2C8P10632 490 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 SLC26A2P50443 739 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 LLGL1Q15334 1064 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 L3MBTL3Q96JM7 780 aaPredicted RBP22.94■■□□□ 1.26
CLN6-224ENST00000638076 PLVAPQ9BX97 442 aa22.94■■□□□ 1.26
CLN6-224ENST00000638076 SLC1A1P43005 524 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 CLCN3P51790 818 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 DRG2P55039 364 aaKnown RBP22.93■■□□□ 1.26
CLN6-224ENST00000638076 MYL6P60660 151 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 LIN9Q5TKA1 542 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 ATP6V1G3Q96LB4 118 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 GOLGA6L10A6NI86 522 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 INO80B-WBP1J3KQ70 363 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 PODXLO00592 558 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 HBP1O60381 514 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 COILP38432 576 aaPredicted RBP22.93■■□□□ 1.26
CLN6-224ENST00000638076 TFDP1Q14186 410 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 DUOXA2Q1HG44 320 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 EFCAB12Q6NXP0 572 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 EFCAB13Q8IY85 973 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 CCDC105Q8IYK2 499 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 THNSL1Q8IYQ7 743 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 UBR7Q8N806 425 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 C1orf131Q8NDD1 294 aaKnown RBP22.93■■□□□ 1.26
CLN6-224ENST00000638076 SYT17Q9BSW7 474 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 INO80BQ9C086 356 aaPredicted RBP22.93■■□□□ 1.26
CLN6-224ENST00000638076 TMBIM4Q9HC24 238 aa22.93■■□□□ 1.26
CLN6-224ENST00000638076 ASB14A6NK59 587 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 ACKR2O00590 384 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 ZNF132P52740 706 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 PLTPP55058 493 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 SNAPC2Q13487 334 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 MPZL3Q6UWV2 235 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 TSHZ1Q6ZSZ6 1077 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 ARMCX2Q7L311 632 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 ZNF606Q8WXB4 792 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 B4GALT5O43286 388 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 PROZP22891 400 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 OSTNP61366 133 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 SKOR1P84550 965 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 TFAMQ00059 246 aaKnown RBP22.92■■□□□ 1.26
CLN6-224ENST00000638076 ZNF844Q08AG5 666 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 SURF1Q15526 300 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 TMEM132AQ24JP5 1023 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 EAPPQ56P03 285 aaPredicted RBP22.92■■□□□ 1.26
CLN6-224ENST00000638076 ATF7IP2Q5U623 682 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 DAB2IPQ5VWQ8 1189 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 MMS22LQ6ZRQ5 1243 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 CDR2LQ86X02 465 aaPredicted RBP22.92■■□□□ 1.26
CLN6-224ENST00000638076 PHF13Q86YI8 300 aaPredicted RBP22.92■■□□□ 1.26
CLN6-224ENST00000638076 SHCBP1Q8NEM2 672 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 VCPIP1Q96JH7 1222 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 FZD8Q9H461 694 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 RNPEPQ9H4A4 650 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 PTPRHQ9HD43 1115 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 ATP8A1Q9Y2Q0 1164 aa22.92■■□□□ 1.26
CLN6-224ENST00000638076 PPFIA2O75334 1257 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 ERLIN2O94905 339 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 IVLP07476 585 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 MYZAPP0CAP1 466 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 CD58P19256 250 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 KCNJ1P48048 391 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 IRAK1P51617 712 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 MAMLD1Q13495 774 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 ZNF568Q3ZCX4 644 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 C12orf50Q8NA57 414 aaPredicted RBP22.91■■□□□ 1.26
CLN6-224ENST00000638076 FBXO25Q8TCJ0 367 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 CENPHQ9H3R5 247 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 MRPL47Q9HD33 250 aaKnown RBP22.91■■□□□ 1.26
CLN6-224ENST00000638076 PTPN22Q9Y2R2 807 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 HMGB1P1B2RPK0 211 aaPredicted RBP22.91■■□□□ 1.26
CLN6-224ENST00000638076 FSCN2O14926 492 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 PROSCO94903 275 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 HOXC6P09630 235 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 RPL21P46778 160 aaKnown RBP22.91■■□□□ 1.26
CLN6-224ENST00000638076 ATP1A2P50993 1020 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 TRPC3Q13507 836 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 SGSM1Q2NKQ1 1148 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 ZDHHC24Q6UX98 284 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 RUNDC3BQ96NL0 473 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 TXLNGYQ9BZA5 131 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 MINDY3Q9H8M7 445 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms