RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SUSD3Q96L08 255 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 RHOBTB2Q9BYZ6 727 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 KCNK12Q9HB15 430 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 UBQLN1Q9UMX0 589 aaKnown RBP19.28■□□□□ 0.68
PNKP-230ENST00000638016 POLIQ9UNA4 740 aa19.28■□□□□ 0.68
PNKP-230ENST00000638016 FRMD3A2A2Y4 597 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 NARSO43776 548 aaKnown RBP19.27■□□□□ 0.68
PNKP-230ENST00000638016 TBC1D4O60343 1298 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 GCNT3O95395 438 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 YEATS4O95619 227 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 C1RP00736 705 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 LRPAP1P30533 357 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 MRPL58Q14197 206 aaKnown RBP19.27■□□□□ 0.68
PNKP-230ENST00000638016 IER5LQ5T953 404 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 CRELD2Q6UXH1 353 aaPredicted RBP19.27■□□□□ 0.68
PNKP-230ENST00000638016 BMP8AQ7Z5Y6 402 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 PANK4Q9NVE7 773 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 FBXL5Q9UKA1 691 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
PNKP-230ENST00000638016 TSC2P49815 1807 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 SYN3O14994 580 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 SEC24AO95486 1093 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 ADRB2P07550 413 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 CASP1P29466 404 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 DNM1Q05193 864 aaKnown RBP19.26■□□□□ 0.67
PNKP-230ENST00000638016 CTXN3Q4LDR2 81 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 SLC8B1Q6J4K2 584 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 CYP26C1Q6V0L0 522 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 SAAL1Q96ER3 474 aa19.26■□□□□ 0.67
PNKP-230ENST00000638016 AGO2Q9UKV8 859 aaKnown RBP19.26■□□□□ 0.67
PNKP-230ENST00000638016 SPTLC1O15269 473 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 CUTAO60888 179 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 PRPF6O94906 941 aaKnown RBP19.25■□□□□ 0.67
PNKP-230ENST00000638016 OR4Q2P0C623 313 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 GAP43P17677 238 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 SCP2P22307 547 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 PLA2G5P39877 138 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 L1TD1Q5T7N2 865 aaKnown RBP19.25■□□□□ 0.67
PNKP-230ENST00000638016 SPATA1Q5VX52 437 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 SCARA3Q6AZY7 606 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 EFCAB13Q8IY85 973 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 FBXL6Q8N531 539 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 ITFG1Q8TB96 612 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 POMGNT1Q8WZA1 660 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 MFSD14AQ96MC6 490 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 DNMT3BQ9UBC3 853 aaKnown RBP19.25■□□□□ 0.67
PNKP-230ENST00000638016 SEL1LQ9UBV2 794 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 PCDHB8Q9UN66 801 aa19.25■□□□□ 0.67
PNKP-230ENST00000638016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.24■□□□□ 0.67
PNKP-230ENST00000638016 TULP1O00294 542 aaPredicted RBP19.24■□□□□ 0.67
PNKP-230ENST00000638016 NRG2O14511 850 aaPredicted RBP19.24■□□□□ 0.67
PNKP-230ENST00000638016 HNRNPA1P09651 372 aaKnown RBP eCLIP19.24■□□□□ 0.67
PNKP-230ENST00000638016 CYP3A5P20815 502 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 FSHRP23945 695 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 AARSP49588 968 aaKnown RBP eCLIP19.24■□□□□ 0.67
PNKP-230ENST00000638016 CDR1P51861 262 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 KYAT1Q16773 422 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 HVCN1Q96D96 273 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 OLFML3Q9NRN5 406 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 EPS15L1Q9UBC2 864 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 PCDHA7Q9UN72 937 aa19.24■□□□□ 0.67
PNKP-230ENST00000638016 GOLGA8IPA6NC78 632 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 GOLGA8JA6NMD2 632 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 M0QZQ0 153 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 ABLIM3O94929 683 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 HOXA9P31269 272 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 TDGQ13569 410 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 TMEM132DQ14C87 1099 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 C9orf57Q5W0N0 161 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 ZNF280DQ6N043 979 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 POTEHQ6S545 545 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 SUGP1Q8IWZ8 645 aaKnown RBP19.23■□□□□ 0.67
PNKP-230ENST00000638016 UBALD2Q8IYN6 164 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 PRSS33Q8NF86 280 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 ZNF461Q8TAF7 563 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 ING5Q8WYH8 240 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 FAM122AQ96E09 287 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 ACCSQ96QU6 501 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 TMEM209Q96SK2 561 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 FAM213AQ9BRX8 229 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 RPP25Q9BUL9 199 aaKnown RBP19.23■□□□□ 0.67
PNKP-230ENST00000638016 TRIM9Q9C026 710 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 KBTBD4Q9NVX7 518 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 ZDHHC9Q9Y397 364 aa19.23■□□□□ 0.67
PNKP-230ENST00000638016 H7C4K7 107 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 VNN2O95498 520 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 LAMP2P13473 410 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 SLC5A9Q2M3M2 681 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 SLFN12LQ6IEE8 588 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 DSTYKQ6XUX3 929 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 RNF19BQ6ZMZ0 732 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 BEST2Q8NFU1 509 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 PGLYRP2Q96PD5 576 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 BLZF1Q9H2G9 400 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 TNMDQ9H2S6 317 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 PCIF1Q9H4Z3 704 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 CYP4F11Q9HBI6 524 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 DUSP12Q9UNI6 340 aa19.22■□□□□ 0.67
PNKP-230ENST00000638016 TCHHQ07283 1943 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms