RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TOPORSQ9NS56 1045 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 ADAM21Q9UKJ8 722 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 HIST1H2AGP0C0S8 130 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 ITGB6P18564 788 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 HIST1H2ADP20671 130 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 NFRKBQ6P4R8 1299 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 TBC1D19Q8N5T2 526 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 HIST1H2AHQ96KK5 128 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 HIST1H2AJQ99878 128 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 H2AFJQ9BTM1 129 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 MAP3K6O95382 1288 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 ERVK-10P10266 1014 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 RAD51Q06609 339 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 FOXP4Q8IVH2 680 aaPredicted RBP17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 CPA5Q8WXQ8 436 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 MFSD1Q9H3U5 465 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 SOX13Q9UN79 622 aa17.84■□□□□ 0.45
CACNA1A-253ENST00000637927 KCNH2Q12809 1159 aa17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 CAPRIN2Q6IMN6 1127 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 CLEC10AQ8IUN9 316 aa17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 PCDHGA3Q9Y5H0 932 aa17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 CDH6P55285 790 aa17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 EIF2AK1Q9BQI3 630 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 INTS2Q9H0H0 1204 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-253ENST00000637927 KPNA7A9QM74 516 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 HMGB1P1B2RPK0 211 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 TYK2P29597 1187 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 GALNTL6Q49A17 601 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 OTOAQ7RTW8 1153 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 TMC4Q7Z404 712 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 VSTM4Q8IW00 320 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 DDX56Q9NY93 547 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 RBAKQ9NYW8 714 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 NLRP1Q9C000 1473 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 ESYT3A0FGR9 886 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 POU1F1P28069 291 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 RESP18Q5W5W9 173 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 CCDC60Q8IWA6 550 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 COPG1Q9Y678 874 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 DYNC1LI2O43237 492 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 NDUFS3O75489 264 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 FTLP02792 175 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 TXNRD1Q16881 649 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 PHACTR4Q8IZ21 702 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 UBA3Q8TBC4 463 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 TRIM33Q9UPN9 1127 aa17.83■□□□□ 0.44
CACNA1A-253ENST00000637927 ARHGEF12Q9NZN5 1544 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 SERPINB3P29508 390 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 USP39Q53GS9 565 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 RABGGTAQ92696 567 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 GCOM2Q9BZD3 368 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 EPC1Q9H2F5 836 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 ABI2Q9NYB9 513 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 RNF149Q8NC42 400 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 GPR63Q9BZJ6 419 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 CHRM3P20309 590 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 ARL4CP56559 192 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 ZBED6P86452 979 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 VAC14Q08AM6 782 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 MRPL39Q9NYK5 338 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 CYP19A1P11511 503 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 SPARCL1Q14515 664 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 NCAPHQ15003 741 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 SMTNL2Q2TAL5 461 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 NSUN6Q8TEA1 469 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 MRPL4Q9BYD3 311 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 TDRKHQ9Y2W6 561 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 COL15A1P39059 1388 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 H0Y626 953 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 ALDH9A1P49189 494 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 GPC5P78333 572 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 OSBPL1AQ9BXW6 950 aa17.82■□□□□ 0.44
CACNA1A-253ENST00000637927 ANGPT2O15123 496 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 FGFR2P21802 821 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 YY1P25490 414 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 ACOT2P49753 483 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 DRAP1Q14919 205 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 BZW1Q7L1Q6 419 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 IPMKQ8NFU5 416 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 MAGEB5Q9BZ81 275 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 SLC39A10Q9ULF5 831 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 CHURC1-FNTBB4DL54 471 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 CDC27P30260 824 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 CARNMT1Q8N4J0 409 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 GIMAP8Q8ND71 665 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 CNBD2Q96M20 576 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 STRBPQ96SI9 672 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 C20orf96Q9NUD7 363 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 CPSF4O95639 269 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 ITGA3P26006 1051 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 FNTAP49354 379 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 CCDC149Q6ZUS6 474 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 RHOBTB2Q9BYZ6 727 aa17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 CHORDC1Q9UHD1 332 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-253ENST00000637927 TGS1Q96RS0 853 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms