RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SRPRBQ9Y5M8 271 aaKnown RBP8.56□□□□□ -1.04
PNKP-229ENST00000637897 STYXL1Q9Y6J8 313 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 CACNA1IQ9P0X4 2223 aa8.56□□□□□ -1.04
PNKP-229ENST00000637897 RIF1Q5UIP0 2472 aaKnown RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 TSC2P49815 1807 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 FRMD3A2A2Y4 597 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 M0QZQ0 153 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 SLC26A4O43511 780 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 POU2F2P09086 479 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 GLULP15104 373 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 MRE11P49959 708 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 ZNF445P59923 1031 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 UBE2HP62256 183 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 CEBPZQ03701 1054 aaKnown RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 TDGQ13569 410 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 PRSS36Q5K4E3 855 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 ATL3Q6DD88 541 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 CAVIN1Q6NZI2 390 aaKnown RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 CYP26C1Q6V0L0 522 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 GET4Q7L5D6 327 aaPredicted RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 MAP4K3Q8IVH8 894 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 PLCD3Q8N3E9 789 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 CXorf38Q8TB03 319 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 GPT2Q8TD30 523 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 LARP4BQ92615 738 aaKnown RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 DDX12PQ92771 950 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 FGF13Q92913 245 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 TCEAL4Q96EI5 215 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 SUSD3Q96L08 255 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 UROC1Q96N76 676 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 TMEM209Q96SK2 561 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 RTP3Q9BQQ7 232 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 LRRC3Q9BY71 257 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 ST6GALNAC4Q9H4F1 302 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 DLGAP2Q9P1A6 1054 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 TIMM13Q9Y5L4 95 aaPredicted RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 NUMBLQ9Y6R0 609 aa8.55□□□□□ -1.04
PNKP-229ENST00000637897 MORC2Q9Y6X9 1032 aaPredicted RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 ZFHX2Q9C0A1 2572 aaPredicted RBP8.55□□□□□ -1.04
PNKP-229ENST00000637897 F5P12259 2224 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 GPR179Q6PRD1 2367 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 ARHGEF37A1IGU5 675 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 H0Y858 1186 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 CLDN3O15551 220 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 LRRN2O75325 713 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 NFICP08651 508 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 OR4Q2P0C623 313 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 FCARP24071 287 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 HOXA9P31269 272 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 GBP2P32456 591 aaPredicted RBP8.54□□□□□ -1.04
PNKP-229ENST00000637897 RPL9P32969 192 aaKnown RBP8.54□□□□□ -1.04
PNKP-229ENST00000637897 HOXD13P35453 343 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 UBA7P41226 1012 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 NASPP49321 788 aaPredicted RBP8.54□□□□□ -1.04
PNKP-229ENST00000637897 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
PNKP-229ENST00000637897 ELAVL2Q12926 359 aaKnown RBP8.54□□□□□ -1.04
PNKP-229ENST00000637897 SLC39A14Q15043 492 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 E2F4Q16254 413 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 DYMQ7RTS9 669 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 ZNF720Q7Z2F6 126 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 SFR1Q86XK3 245 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 NPAS3Q8IXF0 933 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 EFCAB13Q8IY85 973 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 HS6ST3Q8IZP7 471 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 MYCT1Q8N699 235 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 TTC9BQ8N6N2 239 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 BEST2Q8NFU1 509 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 ZNF461Q8TAF7 563 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 GPR152Q8TDT2 470 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 ACSF2Q96CM8 615 aaPredicted RBP8.54□□□□□ -1.04
PNKP-229ENST00000637897 CHAMP1Q96JM3 812 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 TCHPQ9BT92 498 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 PANK2Q9BZ23 570 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 PARVGQ9HBI0 331 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 CEP72Q9P209 647 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 IGSF9Q9P2J2 1179 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 PTPRZ1P23471 2315 aaPredicted RBP8.54□□□□□ -1.04
PNKP-229ENST00000637897 CFAP54Q96N23 3096 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 COL4A2P08572 1712 aa8.54□□□□□ -1.04
PNKP-229ENST00000637897 ANO9A1A5B4 782 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 K7ENM7 598 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 PIRO00625 290 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 SYN3O14994 580 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 OGTO15294 1046 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 GALR2O43603 387 aaPredicted RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 FAM13AO94988 1023 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 OAZ2O95190 189 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 LETM1O95202 739 aaPredicted RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 RHOP08100 348 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 CFHP08603 1231 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 CLTAP09496 248 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 HNRNPA1P09651 372 aaKnown RBP eCLIP8.53□□□□□ -1.04
PNKP-229ENST00000637897 ATF2P15336 505 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 CEBPBP17676 345 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 FSHRP23945 695 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 ACOT2P49753 483 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 CDR1P51861 262 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 SMTNP53814 917 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms