RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 CXCL8P10145 99 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 HARSP12081 509 aaKnown RBP13.87□□□□□ -0.19
CTSD-210ENST00000637381 PTPN2P17706 415 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 TNFSF9P41273 254 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 STARD6P59095 220 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 KARSQ15046 597 aaKnown RBP13.87□□□□□ -0.19
CTSD-210ENST00000637381 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
CTSD-210ENST00000637381 SLC39A4Q6P5W5 647 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 POTEHQ6S545 545 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 MYCT1Q8N699 235 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 APPL2Q8NEU8 664 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 BEST2Q8NFU1 509 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 DDX12PQ92771 950 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 OXCT2Q9BYC2 517 aaPredicted RBP13.87□□□□□ -0.19
CTSD-210ENST00000637381 DLGAP2Q9P1A6 1054 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 UBQLN1Q9UMX0 589 aaKnown RBP13.87□□□□□ -0.19
CTSD-210ENST00000637381 POLIQ9UNA4 740 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 STYXL1Q9Y6J8 313 aa13.87□□□□□ -0.19
CTSD-210ENST00000637381 HNRNPDLO14979 420 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 FAM13AO94988 1023 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 SEC24AO95486 1093 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 RHOP08100 348 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 LIG4P49917 911 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 GPC5P78333 572 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 POU5F1Q01860 360 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 SLC5A9Q2M3M2 681 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 PRSS36Q5K4E3 855 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 SPATA1Q5VX52 437 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 USP49Q70CQ1 688 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 MAP4K3Q8IVH8 894 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 CD302Q8IX05 232 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 LARP4BQ92615 738 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 EPSTI1Q96J88 318 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 DDX23Q9BUQ8 820 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 STRA6Q9BX79 667 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 ARHGEF3Q9NR81 526 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 AFF4Q9UHB7 1163 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 FBXO2Q9UK22 296 aaPredicted RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 CPSF3Q9UKF6 684 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 CA14Q9ULX7 337 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 SRPRBQ9Y5M8 271 aaKnown RBP13.86□□□□□ -0.19
CTSD-210ENST00000637381 CLIC4Q9Y696 253 aa13.86□□□□□ -0.19
CTSD-210ENST00000637381 ECI2O75521 394 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 SYT1P21579 422 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 PAX3P23760 479 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 ELF1P32519 619 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 MCM4P33991 863 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 EPHA5P54756 1037 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 PPP2R3AQ06190 1150 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 SPAG1Q07617 926 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 RESTQ13127 1097 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 DHX8Q14562 1220 aaKnown RBP13.85□□□□□ -0.19
CTSD-210ENST00000637381 CTXN3Q4LDR2 81 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 ZBTB41Q5SVQ8 909 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 ZNF280DQ6N043 979 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 TMEM130Q8N3G9 435 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 BICD1Q96G01 975 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 RPF1Q9H9Y2 349 aaKnown RBP13.85□□□□□ -0.19
CTSD-210ENST00000637381 TBC1D17Q9HA65 648 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 CYP4F11Q9HBI6 524 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 DERAQ9Y315 318 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 MRPS23Q9Y3D9 190 aaKnown RBP13.85□□□□□ -0.19
CTSD-210ENST00000637381 INSL5Q9Y5Q6 135 aa13.85□□□□□ -0.19
CTSD-210ENST00000637381 MIA3Q5JRA6 1907 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 ANKRD63C9JTQ0 380 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 K7ENM7 598 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 PRRG1O14668 218 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 XPOTO43592 962 aaKnown RBP13.84□□□□□ -0.19
CTSD-210ENST00000637381 GFRA3O60609 400 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 PPP1R37O75864 691 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 VNN2O95498 520 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 LRG1P02750 347 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 MARCKSP29966 332 aaPredicted RBP13.84□□□□□ -0.19
CTSD-210ENST00000637381 NMT1P30419 496 aaKnown RBP13.84□□□□□ -0.19
CTSD-210ENST00000637381 MATR3P43243 847 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTSD-210ENST00000637381 ANGPT1Q15389 498 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 ZNF720Q7Z2F6 126 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 ST13P5Q8NFI4 369 aaPredicted RBP13.84□□□□□ -0.19
CTSD-210ENST00000637381 SHDQ96IW2 340 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 MSTO1Q9BUK6 570 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 STK17AQ9UEE5 414 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 SIT1Q9Y3P8 196 aa13.84□□□□□ -0.19
CTSD-210ENST00000637381 FRYLO94915 3013 aa13.83□□□□□ -0.19
CTSD-210ENST00000637381 FANCMQ8IYD8 2048 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 TSC2P49815 1807 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 ANO9A1A5B4 782 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 VPS37CA5D8V6 355 aaPredicted RBP13.83□□□□□ -0.2
CTSD-210ENST00000637381 PIRO00625 290 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 ZNF197O14709 1029 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 KRT18P05783 430 aaKnown RBP13.83□□□□□ -0.2
CTSD-210ENST00000637381 TYMPP19971 482 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 ARPP19P56211 112 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 LILRA4P59901 499 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 PFKPQ01813 784 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 PRKCQQ04759 706 aa13.83□□□□□ -0.2
CTSD-210ENST00000637381 YWHAHQ04917 246 aaPredicted RBP13.83□□□□□ -0.2
CTSD-210ENST00000637381 ADCY1Q08828 1119 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms