RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 C8AP07357 584 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 HNRNPA1P09651 372 aaKnown RBP eCLIP14.99□□□□□ -0.01
PNKP-228ENST00000637325 LRPAP1P30533 357 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 ELF1P32519 619 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 GUCY2FP51841 1108 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 ARPP19P56211 112 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 ASIC1P78348 528 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 TMEM132DQ14C87 1099 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 ZBTB6Q15916 424 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 AXDND1Q5T1B0 1012 aaPredicted RBP14.99□□□□□ -0.01
PNKP-228ENST00000637325 JADE1Q6IE81 842 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 RSPO2Q6UXX9 243 aaPredicted RBP14.99□□□□□ -0.01
PNKP-228ENST00000637325 DSTYKQ6XUX3 929 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 ZNF707Q96C28 371 aaPredicted RBP14.99□□□□□ -0.01
PNKP-228ENST00000637325 SUSD3Q96L08 255 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 STRA6Q9BX79 667 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 TMEM206Q9H813 350 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 KBTBD4Q9NVX7 518 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 RAPGEFL1Q9UHV5 662 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 PCDHB8Q9UN66 801 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 POLIQ9UNA4 740 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 STYXL1Q9Y6J8 313 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 NOTCH4Q99466 2003 aa14.99□□□□□ -0.01
PNKP-228ENST00000637325 ZNF318Q5VUA4 2279 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 CCL16O15467 120 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 PRPF6O94906 941 aaKnown RBP14.98□□□□□ -0.01
PNKP-228ENST00000637325 ASGR2P07307 311 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 ADRB2P07550 413 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 CASP5P51878 434 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 SIGLEC14Q08ET2 396 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 KCNA1Q09470 495 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 MTMR3Q13615 1198 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 E2F4Q16254 413 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 CTXN3Q4LDR2 81 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 SPATA1Q5VX52 437 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 ZNF280DQ6N043 979 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 SLC7A14Q8TBB6 771 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 NOC3LQ8WTT2 800 aaKnown RBP14.98□□□□□ -0.01
PNKP-228ENST00000637325 MFSD14AQ96MC6 490 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 PYM1Q9BRP8 204 aaKnown RBP14.98□□□□□ -0.01
PNKP-228ENST00000637325 IKZF4Q9H2S9 585 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 ASB7Q9H672 318 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 MAGEF1Q9HAY2 307 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 RCOR1Q9UKL0 485 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 SORCS3Q9UPU3 1222 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 DERAQ9Y315 318 aa14.98□□□□□ -0.01
PNKP-228ENST00000637325 PRRG1O14668 218 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 LDHAP00338 332 aaKnown RBP14.97□□□□□ -0.01
PNKP-228ENST00000637325 NFICP08651 508 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 ADSSP30520 456 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
PNKP-228ENST00000637325 BECN1Q14457 450 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 RESP18Q5W5W9 173 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 HFE2Q6ZVN8 426 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 GET4Q7L5D6 327 aaPredicted RBP14.97□□□□□ -0.01
PNKP-228ENST00000637325 USP37Q86T82 979 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 UBALD2Q8IYN6 164 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 CEP57L1Q8IYX8 460 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 ZNF461Q8TAF7 563 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 PBXIP1Q96AQ6 731 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 FAM213AQ9BRX8 229 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 TRIM9Q9C026 710 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 FBXL5Q9UKA1 691 aa14.97□□□□□ -0.01
PNKP-228ENST00000637325 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.96□□□□□ -0.01
PNKP-228ENST00000637325 M0QZQ0 153 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 IL18RAPO95256 599 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 PAPLNO95428 1278 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 GARTP22102 1010 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 FSHRP23945 695 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 HOXA9P31269 272 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 KRT85P78386 507 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 ROR1Q01973 937 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 YWHAHQ04917 246 aaPredicted RBP14.96□□□□□ -0.01
PNKP-228ENST00000637325 MRPL58Q14197 206 aaKnown RBP14.96□□□□□ -0.01
PNKP-228ENST00000637325 C9orf57Q5W0N0 161 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 SLC8B1Q6J4K2 584 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 RTL10Q7L3V2 364 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 GRASPQ7Z6J2 395 aaPredicted RBP14.96□□□□□ -0.01
PNKP-228ENST00000637325 SAAL1Q96ER3 474 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 SPATA32Q96LK8 384 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 C7orf25Q9BPX7 421 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 FGFBP2Q9BYJ0 223 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 DPP3Q9NY33 737 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.96□□□□□ -0.011e-7■■■□□ 14.9
PNKP-228ENST00000637325 KCNH3Q9ULD8 1083 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 C2CD2Q9Y426 696 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 ATP6V1DQ9Y5K8 247 aa14.96□□□□□ -0.01
PNKP-228ENST00000637325 ARHGEF37A1IGU5 675 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 WDR27A2RRH5 827 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 LRG1P02750 347 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 CPB1P15086 417 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 PAX3P23760 479 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 AFMP43652 599 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 LILRA4P59901 499 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 ARMCX5Q6P1M9 558 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 CRELD2Q6UXH1 353 aaPredicted RBP14.95□□□□□ -0.02
PNKP-228ENST00000637325 SUGP1Q8IWZ8 645 aaKnown RBP14.95□□□□□ -0.02
PNKP-228ENST00000637325 HPS3Q969F9 1004 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms