RNA–Protein interactions for RNA: ENST00000636901.1

CACNB4-238, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-238	ENST00000636901	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	USP29	Q9HBJ7	922 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	TXLNG	Q9NUQ3	528 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	USP40	Q9NVE5	1235 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	USE1	Q9NZ43	259 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	AFF4	Q9UHB7	1163 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	ZHX1	Q9UKY1	873 aa	Predicted RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	PALD1	Q9ULE6	856 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	PCDHGB4	Q9UN71	923 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	COLEC10	Q9Y6Z7	277 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	ZNF804B	A4D1E1	1349 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	IBTK	Q9P2D0	1353 aa	Predicted RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	MST1R	Q04912	1400 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	IQCM	A0A1B0GVH7	501 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	MDFIC2	A0A1B0GVS7	189 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	ONECUT3	O60422	494 aa	Predicted RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	KRT6A	P02538	564 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	KRT6B	P04259	564 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	KRT1	P04264	644 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	CYBB	P04839	570 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	PPP2R1A	P30153	589 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	KRT6C	P48668	564 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	ARHGDIB	P52566	201 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	RIDA	P52758	137 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	ADK	P55263	362 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	LBR	Q14739	615 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	SUZ12	Q15022	739 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	CWC27	Q6UX04	472 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	RASSF6	Q6ZTQ3	369 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	ZBTB8OS	Q8IWT0	167 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	EFHB	Q8N7U6	833 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	PIP4K2C	Q8TBX8	421 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	THUMPD2	Q9BTF0	503 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	SLC26A6	Q9BXS9	759 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	MRPL9	Q9BYD2	267 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	THEG	Q9P2T0	379 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	NCDN	Q9UBB6	729 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	LSM7	Q9UK45	103 aa	Known RBP	2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	PAXBP1	Q9Y5B6	917 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	PSAT1	Q9Y617	370 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	IQGAP1	P46940	1657 aa		2.91	□□□□□ -1.94
CACNB4-238	ENST00000636901	CCDC163	A0A0D9SF12	145 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901		A0A1B0GVL5	298 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CLIC2	O15247	247 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CFLAR	O15519	480 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	TRIM3	O75382	744 aa	Predicted RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ANP32D	O95626	131 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	NUDT17	P0C025	328 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	GRK4	P32298	578 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	HNMT	P50135	292 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ETF1	P62495	437 aa	Known RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ECH1	Q13011	328 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	RIN1	Q13671	783 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	LLGL1	Q15334	1064 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	MEA1	Q16626	185 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ATP13A4	Q4VNC1	1196 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	DCAF17	Q5H9S7	520 aa	Predicted RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	FAAH2	Q6GMR7	532 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ALKBH5	Q6P6C2	394 aa	Known RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CYB5D1	Q6P9G0	228 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	HEATR3	Q7Z4Q2	680 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	PLEKHH3	Q7Z736	793 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	MCEMP1	Q8IX19	187 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	UCMA	Q8WVF2	138 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CCDC127	Q96BQ5	260 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	HAUS1	Q96CS2	278 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	YME1L1	Q96TA2	773 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	KRT12	Q99456	494 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CNGB3	Q9NQW8	809 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	TMEM39A	Q9NV64	488 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	SH3BGRL2	Q9UJC5	107 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	TSR3	Q9UJK0	312 aa	Known RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	EXOC7	Q9UPT5	735 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ABCB11	O95342	1321 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	RTL9	Q8NET4	1388 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	TET3	O43151	1660 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	TNS2	Q63HR2	1409 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	RPTOR	Q8N122	1335 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	TMEM120B	A0PK00	339 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	PITPNM1	O00562	1244 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	SORBS3	O60504	671 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	MYB	P10242	640 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CTSE	P14091	401 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	HNRNPH1	P31943	449 aa	Known RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	DEK	P35659	375 aa	Known RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ALDH1A3	P47895	512 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	ATP12A	P54707	1039 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	MTTP	P55157	894 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	SRP54	P61011	504 aa	Known RBP	2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	CYP4A11	Q02928	519 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	PPAT	Q06203	517 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	NFIX	Q14938	502 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	C4orf46	Q504U0	113 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	AGBL2	Q5U5Z8	902 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	SLFN12L	Q6IEE8	588 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	DEF8	Q6ZN54	512 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	RAB11FIP2	Q7L804	512 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	SCN4B	Q8IWT1	228 aa		2.9	□□□□□ -1.94
CACNB4-238	ENST00000636901	GIPC3	Q8TF64	312 aa		2.9	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms