RNA–Protein interactions for RNA: ENST00000636221.1

SMARCA2-248, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-248ENST00000636221 FILIP1Q7Z7B0 1213 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 USP37Q86T82 979 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 RBM23Q86U06 439 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 TMEM173Q86WV6 379 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 NT5DC4Q86YG4 428 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 WDR49Q8IV35 697 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 SLC9A9Q8IVB4 645 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 GLYCTKQ8IVS8 523 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 VPS52Q8N1B4 723 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 OR5B17Q8NGF7 314 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 SPPL3Q8TCT6 385 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 BCL7CQ8WUZ0 217 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 AUTS2Q8WXX7 1259 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 MYLIPQ8WY64 445 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 ZNF516Q92618 1163 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 IGSF21Q96ID5 467 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 B3GALT6Q96L58 329 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 MFSD14AQ96MC6 490 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 FBXL18Q96ME1 805 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 CEP63Q96MT8 703 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 TSPAN18Q96SJ8 248 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 CDX2Q99626 313 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 CGRRF1Q99675 332 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 DUSP9Q99956 384 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 TCF25Q9BQ70 676 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 PLVAPQ9BX97 442 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 GPR62Q9BZJ7 368 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 NAT10Q9H0A0 1025 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 IGFLR1Q9H665 355 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 ENTPD7Q9NQZ7 604 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 TLR9Q9NR96 1032 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 INTS13Q9NVM9 706 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 MAGEC2Q9UBF1 373 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 ADAM28Q9UKQ2 775 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 ITGA11Q9UKX5 1188 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 AGAP1Q9UPQ3 857 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 C2CD2Q9Y426 696 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 PCDHGC5Q9Y5F6 944 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 SF3B1O75533 1304 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 PTPRJQ12913 1337 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 HELZP42694 1942 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 REV3LO60673 3130 aa4.38□□□□□ -1.71
SMARCA2-248ENST00000636221 ATG2BQ96BY7 2078 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PATJQ8NI35 1801 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 MIA3Q5JRA6 1907 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SPDYE4A6NLX3 237 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 KPNA7A9QM74 516 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PES1O00541 588 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 CYB561D2O14569 222 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PPEF2O14830 753 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PER2O15055 1255 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SLC16A3O15427 465 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 TRAPPC3O43617 180 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 STX10O60499 249 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 CXCL14O95715 111 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 GNA14O95837 355 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 CST3P01034 146 aaPredicted RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SOD2P04179 222 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 FOSL2P15408 326 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 CYP3A5P20815 502 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 CDK11BP21127 795 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 KLRC2P26717 231 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 LRPAP1P30533 357 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 POLR2BP30876 1174 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 IRS1P35568 1242 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PIK3CAP42336 1068 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 GLUD2P49448 558 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 TAF6P49848 677 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 ARPP19P56211 112 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 ERVFC1P60507 584 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 MYL6P60660 151 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 RBP5P82980 135 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PLCB3Q01970 1234 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 UBE3AQ05086 875 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PPP3CAQ08209 521 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 ELAVL2Q12926 359 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 MYO1EQ12965 1108 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 NCOA4Q13772 614 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SMC1AQ14683 1233 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SKIV2LQ15477 1246 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 USP41Q3LFD5 358 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SV2CQ496J9 727 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 TIGD5Q53EQ6 642 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 TDRD10Q5VZ19 366 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SCARA3Q6AZY7 606 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 GPR153Q6NV75 609 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 SCARA5Q6ZMJ2 495 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 TRAPPC11Q7Z392 1133 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 FRMD5Q7Z6J6 570 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 DDX53Q86TM3 631 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 METTL23Q86XA0 190 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 FAM114A1Q8IWE2 563 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 AOPEPQ8N6M6 819 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 C1orf127Q8N9H9 656 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 C3orf58Q8NDZ4 430 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PLEKHO2Q8TD55 490 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 TMC2Q8TDI7 906 aa4.37□□□□□ -1.71
SMARCA2-248ENST00000636221 PARD3BQ8TEW8 1205 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms