RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TEAD2Q15562 447 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 UPP1Q16831 310 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 PKN3Q6P5Z2 889 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 BLIDQ8IZY5 108 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 ELMOD1Q8N336 334 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 LEMD2Q8NC56 503 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 FAM200AQ8TCP9 573 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 FZD8Q9H461 694 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 PDZD7Q9H5P4 517 aa20.03■□□□□ 0.8
CLN6-212ENST00000636020 DGAT1O75907 488 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 IFNAR1P17181 557 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 CSRP1P21291 193 aaKnown RBP20.02■□□□□ 0.8
CLN6-212ENST00000636020 ARPP19P56211 112 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 FGD1P98174 961 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 CYP4A11Q02928 519 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 FAM187BQ17R55 369 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 INF2Q27J81 1249 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 TPGS2Q68CL5 300 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 NOSTRINQ8IVI9 506 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 TTC8Q8TAM2 541 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 SHKBP1Q8TBC3 707 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 HAS1Q92839 578 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 PPP1R10Q96QC0 940 aaKnown RBP20.02■□□□□ 0.8
CLN6-212ENST00000636020 DUSP15Q9H1R2 295 aaPredicted RBP20.02■□□□□ 0.8
CLN6-212ENST00000636020 PRMT7Q9NVM4 692 aaPredicted RBP20.02■□□□□ 0.8
CLN6-212ENST00000636020 GTSE1Q9NYZ3 720 aa20.02■□□□□ 0.8
CLN6-212ENST00000636020 EML5Q05BV3 1969 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 N4BP3O15049 544 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 SLITRK3O94933 977 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 PRKCBP05771 671 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 TWF1Q12792 350 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 NPY5RQ15761 445 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 NCAPH2Q6IBW4 605 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 TPH2Q8IWU9 490 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 BRF1Q92994 677 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 UROC1Q96N76 676 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 LRRC3BQ96PB8 259 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 SLITRK6Q9H5Y7 841 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 ASAH2Q9NR71 780 aa20.01■□□□□ 0.79
CLN6-212ENST00000636020 CAVIN2O95810 425 aa20■□□□□ 0.79
CLN6-212ENST00000636020 HMGB1P09429 215 aaKnown RBP20■□□□□ 0.79
CLN6-212ENST00000636020 MRPL58Q14197 206 aaKnown RBP20■□□□□ 0.79
CLN6-212ENST00000636020 GLRA4Q5JXX5 417 aa20■□□□□ 0.79
CLN6-212ENST00000636020 Q6ZUG5 572 aa20■□□□□ 0.79
CLN6-212ENST00000636020 DAGLBQ8NCG7 672 aa20■□□□□ 0.79
CLN6-212ENST00000636020 POLR3FQ9H1D9 316 aaPredicted RBP20■□□□□ 0.79
CLN6-212ENST00000636020 GOLGA2P5Q9HBQ8 144 aa20■□□□□ 0.79
CLN6-212ENST00000636020 GDAQ9Y2T3 454 aa20■□□□□ 0.79
CLN6-212ENST00000636020 LNP1A1A4G5 178 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 BCLAF3A2AJT9 711 aaKnown RBP19.99■□□□□ 0.79
CLN6-212ENST00000636020 LRRIQ4A6NIV6 560 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 LYPLA2O95372 231 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 CPA1P15085 419 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 KRT32Q14532 448 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 ARHGAP29Q52LW3 1261 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 CDCA2Q69YH5 1023 aaPredicted RBP19.99■□□□□ 0.79
CLN6-212ENST00000636020 PPP4R3AQ6IN85 833 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 GPIHBP1Q8IV16 184 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 ARID3BQ8IVW6 561 aaPredicted RBP19.99■□□□□ 0.79
CLN6-212ENST00000636020 ZFYVE19Q96K21 471 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 ANKEF1Q9NU02 776 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 FBXL5Q9UKA1 691 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 SLC8A2Q9UPR5 921 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 NEUROG3Q9Y4Z2 214 aa19.99■□□□□ 0.79
CLN6-212ENST00000636020 H7C4K7 107 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 CREB5Q02930 508 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 ELF2Q15723 593 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 SOWAHCQ53LP3 525 aaPredicted RBP19.98■□□□□ 0.79
CLN6-212ENST00000636020 CAMKK1Q8N5S9 505 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 KIF12Q96FN5 646 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 ADPGKQ9BRR6 497 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 LRRC3Q9BY71 257 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 AFF4Q9UHB7 1163 aaKnown RBP19.98■□□□□ 0.79
CLN6-212ENST00000636020 MAFFQ9ULX9 164 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 USP20Q9Y2K6 914 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 ATG2BQ96BY7 2078 aa19.98■□□□□ 0.79
CLN6-212ENST00000636020 ASH1LQ9NR48 2969 aaKnown RBP19.98■□□□□ 0.79
CLN6-212ENST00000636020 TRIP11Q15643 1979 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 CDX4O14627 284 aaPredicted RBP19.97■□□□□ 0.79
CLN6-212ENST00000636020 SYN3O14994 580 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 ATG13O75143 517 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 RHOBTB1O94844 696 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 GCFC2P16383 781 aaKnown RBP19.97■□□□□ 0.79
CLN6-212ENST00000636020 RARRES1P49788 294 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 PRPF4BQ13523 1007 aaKnown RBP19.97■□□□□ 0.79
CLN6-212ENST00000636020 EEF1DP3Q658K8 133 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 KRT25Q7Z3Z0 450 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 HAUS6Q7Z4H7 955 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 TMEM209Q96SK2 561 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 TMEM9BQ9NQ34 198 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 GPRC5CQ9NQ84 441 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 MSRB2Q9Y3D2 182 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 PCNX2A6NKB5 2137 aa19.97■□□□□ 0.79
CLN6-212ENST00000636020 A0A1W2PRU2 124 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 HYAL3O43820 417 aaPredicted RBP19.96■□□□□ 0.79
CLN6-212ENST00000636020 CACNB1Q02641 598 aaPredicted RBP19.96■□□□□ 0.79
CLN6-212ENST00000636020 SOX4Q06945 474 aaPredicted RBP19.96■□□□□ 0.79
CLN6-212ENST00000636020 TNK2Q07912 1038 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 TMEM132AQ24JP5 1023 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 GALNT17Q6IS24 598 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms