RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 CBFA2T2O43439 604 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 ITGB3P05106 788 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 CA3P07451 260 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 KRT19P08727 400 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 TRIM49P0CI25 452 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 TRIM49CP0CI26 452 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
PTPN7-219ENST00000629151 SLC11A1P49279 550 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 CLCNKBP51801 687 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 RABGGTBP53611 331 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 COPB1P53618 953 aaKnown RBP12.43□□□□□ -0.42
PTPN7-219ENST00000629151 ERVK-21P61565 698 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 MYL7Q01449 175 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 SOX4Q06945 474 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-219ENST00000629151 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
PTPN7-219ENST00000629151 PDXDC1Q6P996 788 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 GBP6Q6ZN66 633 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 TTC39CQ8N584 583 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 COLGALT1Q8NBJ5 622 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 SPATA18Q8TC71 538 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 TIFAQ96CG3 184 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 IGSF21Q96ID5 467 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 HPDLQ96IR7 371 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 C11orf84Q9BUA3 381 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-219ENST00000629151 OXCT2Q9BYC2 517 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-219ENST00000629151 DNAI2Q9GZS0 605 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 CXCL16Q9H2A7 254 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 HSD3B7Q9H2F3 369 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 GDAP2Q9NXN4 497 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 TUBGCP4Q9UGJ1 667 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 DSEQ9UL01 958 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 LZTS1Q9Y250 596 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 SSX2IPQ9Y2D8 614 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 DAAM1Q9Y4D1 1078 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 SF3B1O75533 1304 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPN7-219ENST00000629151 LGALS16A8MUM7 142 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 KPNA7A9QM74 516 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 PES1O00541 588 aaKnown RBP12.42□□□□□ -0.42
PTPN7-219ENST00000629151 SYN3O14994 580 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 DNAJB2P25686 324 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 PIK3CAP42336 1068 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 AARSP49588 968 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPN7-219ENST00000629151 LILRA4P59901 499 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 TAP1Q03518 808 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 PPP2R2DQ66LE6 453 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 FAM109BQ6ICB4 259 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-219ENST00000629151 PDE12Q6L8Q7 609 aaKnown RBP12.42□□□□□ -0.42
PTPN7-219ENST00000629151 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
PTPN7-219ENST00000629151 SLC39A11Q8N1S5 342 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 RNF214Q8ND24 703 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 APPL2Q8NEU8 664 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 CXorf38Q8TB03 319 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 DNAJB4Q9UDY4 337 aa12.42□□□□□ -0.42
PTPN7-219ENST00000629151 PTPRJQ12913 1337 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 ASS1P00966 412 aaKnown RBP12.41□□□□□ -0.42
PTPN7-219ENST00000629151 CST3P01034 146 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-219ENST00000629151 HLA-DRAP01903 254 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 TBXAS1P24557 533 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-219ENST00000629151 CTNNB1P35222 781 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 UBASH3AP57075 661 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 FANCCQ00597 558 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 EXOC3L4Q17RC7 722 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 ZNF699Q32M78 642 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 CBWD6Q4V339 395 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 HSP90AA4PQ58FG1 418 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 ZNF667Q5HYK9 610 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 CBWD3Q5JTY5 395 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 MIIPQ5JXC2 388 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 CBWD5Q5RIA9 395 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-219ENST00000629151 DSTYKQ6XUX3 929 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 ENOSF1Q7L5Y1 443 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 TOP6BLQ8N6T0 577 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 TAS1R2Q8TE23 839 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 JAKMIP2Q96AA8 810 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 SUSD3Q96L08 255 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 LMAN2LQ9H0V9 348 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 VPS16Q9H269 839 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 MMRN2Q9H8L6 949 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 CYP3A43Q9HB55 503 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 RTN4Q9NQC3 1192 aaKnown RBP12.41□□□□□ -0.42
PTPN7-219ENST00000629151 TAB2Q9NYJ8 693 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 SIX4Q9UIU6 781 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 YBX2Q9Y2T7 364 aaKnown RBP12.41□□□□□ -0.42
PTPN7-219ENST00000629151 PRG3Q9Y2Y8 225 aaPredicted RBP12.41□□□□□ -0.42
PTPN7-219ENST00000629151 DNAH12Q6ZR08 3092 aa12.41□□□□□ -0.42
PTPN7-219ENST00000629151 MICAL3Q7RTP6 2002 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 A0A1B0GTH6 734 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 A0A1W2PQC6 194 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 LCHNA4D1U4 455 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 M0QZQ0 153 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 HUS1O60921 280 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 FGF18O76093 207 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 VNN1O95497 513 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 ATP1A3P13637 1013 aa12.4□□□□□ -0.42
PTPN7-219ENST00000629151 MYOGP15173 224 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms