RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 MARCH5Q9NX47 278 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 ITGA11Q9UKX5 1188 aa20.33■□□□□ 0.85
MECP2-216ENST00000627864 R3HCC1Q9Y3T6 440 aaKnown RBP20.33■□□□□ 0.85
MECP2-216ENST00000627864 COL4A4P53420 1690 aaPredicted RBP20.32■□□□□ 0.84
MECP2-216ENST00000627864 ANO9A1A5B4 782 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 KCNJ18B7U540 433 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 C5orf67F2Z3F1 127 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 PIRO00625 290 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 ITGB1P05556 798 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 RBP5P82980 135 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 GPM6BQ13491 265 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 KCNJ12Q14500 433 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 IQCB1Q15051 598 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 SV2AQ7L0J3 742 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 C3orf58Q8NDZ4 430 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 SLC35C1Q96A29 364 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 C11orf84Q9BUA3 381 aaPredicted RBP20.32■□□□□ 0.84
MECP2-216ENST00000627864 ALG13Q9NP73 1137 aaKnown RBP20.32■□□□□ 0.84
MECP2-216ENST00000627864 SIX4Q9UIU6 781 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 ADAM28Q9UKQ2 775 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 NUB1Q9Y5A7 615 aa20.32■□□□□ 0.84
MECP2-216ENST00000627864 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.32■□□□□ 0.84
MECP2-216ENST00000627864 ATG2AQ2TAZ0 1938 aa20.31■□□□□ 0.84
MECP2-216ENST00000627864 CST3P01034 146 aaPredicted RBP20.31■□□□□ 0.84
MECP2-216ENST00000627864 GTF2H1P32780 548 aa20.31■□□□□ 0.84
MECP2-216ENST00000627864 KRT17Q04695 432 aa20.31■□□□□ 0.84
MECP2-216ENST00000627864 TRPC3Q13507 836 aa20.31■□□□□ 0.84
MECP2-216ENST00000627864 CDKAL1Q5VV42 579 aa20.31■□□□□ 0.84
MECP2-216ENST00000627864 TDRD10Q5VZ19 366 aaKnown RBP20.31■□□□□ 0.84
MECP2-216ENST00000627864 CD300LGQ6UXG3 332 aa20.31■□□□□ 0.84
MECP2-216ENST00000627864 RANBP2P49792 3224 aaKnown RBP20.31■□□□□ 0.84
MECP2-216ENST00000627864 TMEM265A0A087WTH1 108 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 H3BNC9 293 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 TMEM189-UBE2V1I3L0A0 370 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 RFXAPO00287 272 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 CDK11BP21127 795 aaKnown RBP20.3■□□□□ 0.84
MECP2-216ENST00000627864 EEF1GP26641 437 aaKnown RBP20.3■□□□□ 0.84
MECP2-216ENST00000627864 BRCC3P46736 316 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 PLCB3Q01970 1234 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 KCNH2Q12809 1159 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 ZACNQ401N2 412 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 TCP11X2Q5H9J9 407 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 ZNF697Q5TEC3 545 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 KRT39Q6A163 491 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 FUT10Q6P4F1 479 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 C15orf39Q6ZRI6 1047 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 LUZP1Q86V48 1076 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 CXorf38Q8TB03 319 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 FAM200AQ8TCP9 573 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 TTYH1Q9H313 450 aaPredicted RBP20.3■□□□□ 0.84
MECP2-216ENST00000627864 TMEM8AQ9HCN3 771 aa20.3■□□□□ 0.84
MECP2-216ENST00000627864 MYO7AQ13402 2215 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 EPOPA6NHQ4 379 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 I3L4J1 428 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 VNN1O95497 513 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 TAF6P49848 677 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 MXI1P50539 228 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 DDX53Q86TM3 631 aaKnown RBP20.29■□□□□ 0.84
MECP2-216ENST00000627864 SPPL3Q8TCT6 385 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 ZNF560Q96MR9 790 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 TUBGCP2Q9BSJ2 902 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 GPR62Q9BZJ7 368 aa20.29■□□□□ 0.84
MECP2-216ENST00000627864 PUF60Q9UHX1 559 aaKnown RBP20.29■□□□□ 0.84
MECP2-216ENST00000627864 SPTLC1O15269 473 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 GRM6O15303 877 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 CLSTN1O94985 981 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 HLA-DRAP01903 254 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 AFPP02771 609 aaKnown RBP20.28■□□□□ 0.84
MECP2-216ENST00000627864 PRKCSHP14314 528 aaPredicted RBP20.28■□□□□ 0.84
MECP2-216ENST00000627864 PNPLA4P41247 253 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 PIK3CAP42336 1068 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 FMO5P49326 533 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 LILRA4P59901 499 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 MYL6P60660 151 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 MYO1EQ12965 1108 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 NCOA4Q13772 614 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 MAN2A1Q16706 1144 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 SV2CQ496J9 727 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 CBWD6Q4V339 395 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 TIGD5Q53EQ6 642 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 CBWD3Q5JTY5 395 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 CBWD5Q5RIA9 395 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 DSTYKQ6XUX3 929 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 LRRC52Q8N7C0 313 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 GDPD5Q8WTR4 605 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 HPDLQ96IR7 371 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 FAM161BQ96MY7 647 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 ANP32EQ9BTT0 268 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 VN1R3Q9BXE9 311 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 HSD3B7Q9H2F3 369 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 TAB2Q9NYJ8 693 aa20.28■□□□□ 0.84
MECP2-216ENST00000627864 SF3B1O75533 1304 aaKnown RBP eCLIP20.27■□□□□ 0.842e-8■■■■■ 40.2
MECP2-216ENST00000627864 GOLGA6L19H0YKK7 550 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 N4BP1O75113 896 aaKnown RBP20.27■□□□□ 0.84
MECP2-216ENST00000627864 ZNF18P17022 549 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 TPM4P67936 248 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 MYL7Q01449 175 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 ELAVL2Q12926 359 aaKnown RBP20.27■□□□□ 0.84
MECP2-216ENST00000627864 FAM171A1Q5VUB5 890 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms