RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 POSTNQ15063 836 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 CTXN3Q4LDR2 81 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 IER5LQ5T953 404 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 ZNF280DQ6N043 979 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 SLC44A3Q8N4M1 653 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 BEST2Q8NFU1 509 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 RSAD2Q8WXG1 361 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 DNAJC19Q96DA6 116 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 STRA6Q9BX79 667 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 LRRC27Q9C0I9 530 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 MFSD1Q9H3U5 465 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 ASB7Q9H672 318 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 FBXL5Q9UKA1 691 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 AGO2Q9UKV8 859 aaKnown RBP11.78□□□□□ -0.52
SSBP4-215ENST00000625926 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 DUSP12Q9UNI6 340 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
SSBP4-215ENST00000625926 C5orf42Q9H799 3197 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 WDR27A2RRH5 827 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 M0QZQ0 153 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 PRRG1O14668 218 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 PPP1R37O75864 691 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 LRG1P02750 347 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 ATF2P15336 505 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 PAX3P23760 479 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 ACOT2P49753 483 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 VCPP55072 806 aaKnown RBP11.77□□□□□ -0.53
SSBP4-215ENST00000625926 NTHL1P78549 312 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 POU5F1Q01860 360 aaKnown RBP11.77□□□□□ -0.53
SSBP4-215ENST00000625926 FOXD4L5Q5VV16 416 aaPredicted RBP11.77□□□□□ -0.53
SSBP4-215ENST00000625926 SPATA1Q5VX52 437 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 TPGS2Q68CL5 300 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 JADE1Q6IE81 842 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 TCEAL8Q8IYN2 117 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 PDILTQ8N807 584 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 FOXD4L4Q8WXT5 416 aaPredicted RBP11.77□□□□□ -0.53
SSBP4-215ENST00000625926 ACCSQ96QU6 501 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 OXCT2Q9BYC2 517 aaPredicted RBP11.77□□□□□ -0.53
SSBP4-215ENST00000625926 CYP4F11Q9HBI6 524 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 OLFML3Q9NRN5 406 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 PANK4Q9NVE7 773 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 TBC1D7Q9P0N9 293 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 DNMT3BQ9UBC3 853 aaKnown RBP11.77□□□□□ -0.53
SSBP4-215ENST00000625926 FBXL21Q9UKT6 434 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 CDH7Q9ULB5 785 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 KCNH3Q9ULD8 1083 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 MAFFQ9ULX9 164 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 DERAQ9Y315 318 aa11.77□□□□□ -0.53
SSBP4-215ENST00000625926 A0A087X0B3 334 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 ARHGEF37A1IGU5 675 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 FRMD3A2A2Y4 597 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 TISP43B9A030 160 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 ANHXE9PGG2 379 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 CUTAO60888 179 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 OAZ2O95190 189 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 GCNT3O95395 438 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 YEATS4O95619 227 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 ZSCAN22P10073 491 aaPredicted RBP11.76□□□□□ -0.53
SSBP4-215ENST00000625926 PTPN2P17706 415 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 AARSP49588 968 aaKnown RBP eCLIP11.76□□□□□ -0.536e-6■■■■■ 41.5
SSBP4-215ENST00000625926 NUBP1P53384 320 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 YWHAHQ04917 246 aaPredicted RBP11.76□□□□□ -0.53
SSBP4-215ENST00000625926 ALCAMQ13740 583 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 TMEM132DQ14C87 1099 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
SSBP4-215ENST00000625926 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
SSBP4-215ENST00000625926 USP37Q86T82 979 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 POMGNT1Q8WZA1 660 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 FGF13Q92913 245 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 CUEDC2Q9H467 287 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 WNT16Q9UBV4 365 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 AFF4Q9UHB7 1163 aaKnown RBP11.76□□□□□ -0.53
SSBP4-215ENST00000625926 C2CD2Q9Y426 696 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 TIMM13Q9Y5L4 95 aaPredicted RBP11.76□□□□□ -0.53
SSBP4-215ENST00000625926 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
SSBP4-215ENST00000625926 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 NARSO43776 548 aaKnown RBP11.75□□□□□ -0.53
SSBP4-215ENST00000625926 F13A1P00488 732 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 NFICP08651 508 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 SRFP11831 508 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 CPB1P15086 417 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 ADSSP30520 456 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 CLCN5P51795 746 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 GUCY2FP51841 1108 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 PTPN5P54829 565 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 LILRA4P59901 499 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 AMPD3Q01432 767 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 NHLH1Q02575 133 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 ADCY1Q08828 1119 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 KCNA1Q09470 495 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 HTR4Q13639 388 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 FOXD4L6Q3SYB3 417 aaPredicted RBP11.75□□□□□ -0.53
SSBP4-215ENST00000625926 C9orf57Q5W0N0 161 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 ATL3Q6DD88 541 aa11.75□□□□□ -0.53
SSBP4-215ENST00000625926 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
SSBP4-215ENST00000625926 FOXD4L3Q6VB84 417 aaPredicted RBP11.75□□□□□ -0.53
SSBP4-215ENST00000625926 CCDC65Q8IXS2 484 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms