RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PTRHD1Q6GMV3 140 aaKnown RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 MTHFD1LQ6UB35 978 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PID1Q7Z2X4 250 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 APBB2Q92870 758 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PABPC5Q96DU9 382 aaKnown RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 NSMCE4AQ9NXX6 385 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 TLR7Q9NYK1 1049 aaKnown RBP11.68□□□□□ -0.54
VPS8-227ENST00000625842 PLEKHA8P1O95397 391 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.543e-6■■■■■ 61.8
VPS8-227ENST00000625842 STX19Q8N4C7 294 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 ABHD8Q96I13 439 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 PLEKHF1Q96S99 279 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 RAD18Q9NS91 495 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 HEY1Q9Y5J3 304 aa11.68□□□□□ -0.54
VPS8-227ENST00000625842 SPATA31E1Q6ZUB1 1445 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ZNF839A8K0R7 811 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 HADHAP40939 763 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 PDCLQ13371 301 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 MMGT1Q8N4V1 131 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 PDZD8Q8NEN9 1154 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 NR1H4Q96RI1 486 aaPredicted RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 PRPF18Q99633 342 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 ASCC2Q9H1I8 757 aaPredicted RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 UPF3AQ9H1J1 476 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS8-227ENST00000625842 ANAPC7Q9UJX3 599 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 C5orf58C9J3I9 102 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 SUPT3HO75486 399 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ACTR2P61160 394 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 FAM47EQ6ZV65 393 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 SPATA18Q8TC71 538 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 SPATA17Q96L03 361 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 TUBB6Q9BUF5 446 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ASAH2Q9NR71 780 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 SYNPO2Q9UMS6 1093 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 PDXKO00764 312 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 APOL1O14791 398 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 VCPP55072 806 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 ANKRD40Q6AI12 368 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 C4orf22Q6V702 233 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 EXT2Q93063 718 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 RPRD1AQ96P16 312 aaPredicted RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 STK33Q9BYT3 514 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 TET3O43151 1660 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 HEATR9A2RTY3 570 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ERICH4A6NGS2 130 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 POC1B-GALNT4F8VUJ3 575 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ZNF263O14978 683 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 DNAJC8O75937 253 aaPredicted RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 DDHD2O94830 711 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 SYF2O95926 243 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 ADKP55263 362 aaKnown RBP11.67□□□□□ -0.54
VPS8-227ENST00000625842 ANKRD42Q8N9B4 389 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 MIPOL1Q8TD10 442 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 ARHGAP26Q9UNA1 814 aa11.67□□□□□ -0.54
VPS8-227ENST00000625842 A0A088AWK7 358 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 C1QTNF3-AMACRE9PGA6 284 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 STX7O15400 261 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 ZNF10P21506 573 aaPredicted RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 RRM1P23921 792 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 DAB2P98082 770 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 NCOA4Q13772 614 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ANKRD20A4Q4UJ75 823 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ANKRD20A8PQ5CZ79 823 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ANKRD20A2Q5SQ80 823 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ANKRD20A1Q5TYW2 823 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 FAM46CQ5VWP2 391 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 CAPN12Q6ZSI9 719 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 VPS37AQ8NEZ2 397 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ZSCAN18Q8TBC5 510 aaPredicted RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 TINF2Q9BSI4 451 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 MRGBPQ9NV56 204 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 RRN3Q9NYV6 651 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 RNF17Q9BXT8 1623 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 TBC1D3BA6NDS4 549 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 CSF1RP07333 972 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ITGAXP20702 1163 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 HNRNPH2P55795 449 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 PDK1Q15118 436 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 HLA-DQA1Q5Y7H0 255 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ALKBH5Q6P6C2 394 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 TBC1D1Q86TI0 1168 aaPredicted RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 SERPINI1Q99574 410 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 C11orf70Q9BRQ4 267 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 PTPRUQ92729 1446 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 UMODL1Q5DID0 1318 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 POTECB2RU33 542 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 BUB1O43683 1085 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 GJB1P08034 283 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 VCAM1P19320 739 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms