RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 SIX4Q9UIU6 781 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 AJAP1Q9UKB5 411 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-220ENST00000625171 UBQLN1Q9UMX0 589 aaKnown RBP12.65□□□□□ -0.38
LINC00963-220ENST00000625171 NENFQ9UMX5 172 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 PPP2R2CQ9Y2T4 447 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 IPPQ9Y573 584 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 PCDHB2Q9Y5E7 798 aa12.65□□□□□ -0.38
LINC00963-220ENST00000625171 ANO9A1A5B4 782 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 LRRN2O75325 713 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 EOMESO95936 686 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
LINC00963-220ENST00000625171 CLCN1P35523 988 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 EIF4A3P38919 411 aaKnown RBP12.64□□□□□ -0.39
LINC00963-220ENST00000625171 PIK3CAP42336 1068 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 OSTNP61366 133 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 NOP14P78316 857 aaKnown RBP12.64□□□□□ -0.39
LINC00963-220ENST00000625171 RBP5P82980 135 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 TFAMQ00059 246 aaKnown RBP12.64□□□□□ -0.39
LINC00963-220ENST00000625171 PTK2Q05397 1052 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 PAK2Q13177 524 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 TRPC3Q13507 836 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 CUL2Q13617 745 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 TWF2Q6IBS0 349 aaKnown RBP12.64□□□□□ -0.39
LINC00963-220ENST00000625171 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 VPS36Q86VN1 386 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 ZNF677Q86XU0 584 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 PPM1KQ8N3J5 372 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 TATDN2Q93075 761 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 BCO2Q9BYV7 579 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 HAUS4Q9H6D7 363 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 LUC7LQ9NQ29 371 aaKnown RBP12.64□□□□□ -0.39
LINC00963-220ENST00000625171 RGS18Q9NS28 235 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 INTUQ9ULD6 942 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
LINC00963-220ENST00000625171 SMIM28A0A1B0GU29 152 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 PJA2O43164 708 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 RECQL4O94761 1208 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 IPO7O95373 1038 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 NFICP08651 508 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 LRPAP1P30533 357 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 CD52P31358 61 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 MAGEA10P43363 369 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 KIF11P52732 1056 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 MYL6P60660 151 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 YWHAEP62258 255 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 MTF1Q14872 753 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 LMBRD2Q68DH5 695 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 TOGARAM2Q6ZUX3 1019 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 LRRC8DQ7L1W4 858 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 ZNF571Q7Z3V5 609 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 ZNF598Q86UK7 904 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 BEST2Q8NFU1 509 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 OLIG1Q8TAK6 271 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 APBB2Q92870 758 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 PGBD4Q96DM1 585 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 NIF3L1Q9GZT8 377 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 C11orf49Q9H6J7 331 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 ELAC1Q9H777 363 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 APOBEC3GQ9HC16 384 aaKnown RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 SLC38A7Q9NVC3 462 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 DPP3Q9NY33 737 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 MYO1AQ9UBC5 1043 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 ZMYND8Q9ULU4 1186 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-220ENST00000625171 NUB1Q9Y5A7 615 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 ANK1P16157 1881 aa12.63□□□□□ -0.39
LINC00963-220ENST00000625171 VCANP13611 3396 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 BTNL10A8MVZ5 291 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 C9IYK1 514 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 PIRO00625 290 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 ZNF263O14978 683 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 AKR1B10O60218 316 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 CXCL10P02778 98 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 CTSHP09668 335 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 GHRP10912 638 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 GZMAP12544 262 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 ITGA4P13612 1032 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 P4HA1P13674 534 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 PNPLA4P41247 253 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 MBTPS1Q14703 1052 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 GPNMBQ14956 572 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 SPA17Q15506 151 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 NAB2Q15742 525 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 PLEKHG4Q58EX7 1191 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 Q7L0L9 218 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 LIMS2Q7Z4I7 341 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 PPP1R13BQ96KQ4 1090 aa12.62□□□□□ -0.39
LINC00963-220ENST00000625171 PPP1R10Q96QC0 940 aaKnown RBP12.62□□□□□ -0.39
LINC00963-220ENST00000625171 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-220ENST00000625171 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-220ENST00000625171 REXO2Q9Y3B8 237 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms