RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 UGCGQ16739 394 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 GEN1Q17RS7 908 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 EFHC2Q5JST6 749 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 TRAPPC11Q7Z392 1133 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 FRMD5Q7Z6J6 570 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 UCMAQ8WVF2 138 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 APBB2Q92870 758 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 CCDC51Q96ER9 411 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 SYT15Q9BQS2 421 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 DHX35Q9H5Z1 703 aaKnown RBP9.65□□□□□ -0.86
HDAC9-229ENST00000622668 ANAPC7Q9UJX3 599 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 CHD4Q14839 1912 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 TLDC2A0PJX2 215 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 GLUD1P00367 558 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 NCAM1P13591 858 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 GARTP22102 1010 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 LHX1P48742 406 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 FMO5P49326 533 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 SLC12A2P55011 1212 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 PRPSAP1Q14558 356 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 STILQ15468 1287 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 ABHD15Q6UXT9 468 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 METTL16Q86W50 562 aaKnown RBP9.65□□□□□ -0.86
HDAC9-229ENST00000622668 CCDC26Q8TAB7 109 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 C18orf8Q96DM3 657 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 C11orf84Q9BUA3 381 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-229ENST00000622668 SEZ6LQ9BYH1 1024 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 PLEKHA4Q9H4M7 779 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 THG1LQ9NWX6 298 aaKnown RBP9.65□□□□□ -0.86
HDAC9-229ENST00000622668 EPN1Q9Y6I3 576 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-229ENST00000622668 SCINQ9Y6U3 715 aa9.65□□□□□ -0.86
HDAC9-229ENST00000622668 AFDNP55196 1824 aaKnown RBP9.65□□□□□ -0.87
HDAC9-229ENST00000622668 IKBKBO14920 756 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 B4GALT5O43286 388 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 SNAI1O95863 264 aaPredicted RBP9.65□□□□□ -0.87
HDAC9-229ENST00000622668 CALB1P05937 261 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 KCNA2P16389 499 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 SARNPP82979 210 aaKnown RBP9.65□□□□□ -0.87
HDAC9-229ENST00000622668 GPM6BQ13491 265 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 CAPSQ13938 189 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 ZNF792Q3KQV3 632 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 DCAF6Q58WW2 860 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 MDH1BQ5I0G3 518 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 ZPBP2Q6X784 338 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 CCDC149Q6ZUS6 474 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 EFCAB13Q8IY85 973 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 VPS52Q8N1B4 723 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 ASIC4Q96FT7 647 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 TMEM8AQ9HCN3 771 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.65□□□□□ -0.87
HDAC9-229ENST00000622668 ANAPC5Q9UJX4 755 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 NOC2LQ9Y3T9 749 aaKnown RBP9.65□□□□□ -0.87
HDAC9-229ENST00000622668 INSL6Q9Y581 213 aa9.65□□□□□ -0.87
HDAC9-229ENST00000622668 RP1L1Q8IWN7 2480 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 GOLGA8CPA6NN73 597 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 RHOBTB3O94955 611 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 ARIH2O95376 493 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 OR1D2P34982 312 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 EIF4A3P38919 411 aaKnown RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 TUFMP49411 452 aaKnown RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 SLC39A12Q504Y0 691 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 ANO5Q75V66 913 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 CCDC91Q7Z6B0 441 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 CYFIP2Q96F07 1278 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 RPGRIP1Q96KN7 1286 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 SENP8Q96LD8 212 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 COL22A1Q8NFW1 1626 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 UMODL1Q5DID0 1318 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 LACTBL1A8MY62 500 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 HEXIM1O94992 359 aaKnown RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 ATXN3P54252 364 aaPredicted RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 PTENP60484 403 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 MYL6P60660 151 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 ZBED6P86452 979 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 EHHADHQ08426 723 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 PLD1Q13393 1074 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 CDH18Q13634 790 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 KRT33BQ14525 404 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 PSMD5Q16401 504 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 DENND2CQ68D51 928 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 SYT10Q6XYQ8 523 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 TSHZ1Q6ZSZ6 1077 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 DDI1Q8WTU0 396 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 MUC3BQ9H195 1237 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 NXF3Q9H4D5 531 aaKnown RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 SP110Q9HB58 689 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 ASNSD1Q9NWL6 643 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 HEY1Q9Y5J3 304 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 FGFR1P11362 822 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 GOLGA7BQ2TAP0 167 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 EPC2Q52LR7 807 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 CACUL1Q86Y37 369 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 SIAH1Q8IUQ4 282 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 MAIP1Q8WWC4 291 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 SMG7Q92540 1137 aaKnown RBP9.64□□□□□ -0.87
HDAC9-229ENST00000622668 HAS1Q92839 578 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 ZFP42Q96MM3 310 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 MED15Q96RN5 788 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 ASB7Q9H672 318 aa9.64□□□□□ -0.87
HDAC9-229ENST00000622668 IPO11Q9UI26 975 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms