RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 KIAA1524Q8TCG1 905 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 SHC3Q92529 594 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 TAF4BQ92750 862 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 C18orf25Q96B23 403 aaPredicted RBP11.46□□□□□ -0.57
CPNE3-212ENST00000621783 SCLYQ96I15 445 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 FAM81BQ96LP2 452 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 ZFP42Q96MM3 310 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 RPS6KC1Q96S38 1066 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 TSPAN18Q96SJ8 248 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 GAD1Q99259 594 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 FTHL17Q9BXU8 183 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 NIF3L1Q9GZT8 377 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 RSAD1Q9HA92 442 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 RNF19AQ9NV58 838 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 GIT1Q9Y2X7 761 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 SCN5AQ14524 2016 aa11.46□□□□□ -0.57
CPNE3-212ENST00000621783 ESPNB1AK53 854 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 FOXN3O00409 490 aaPredicted RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 PPEF2O14830 753 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 XPOTO43592 962 aaKnown RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 PARNO95453 639 aaKnown RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 CXCL10P02778 98 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 TBXAS1P24557 533 aaPredicted RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 ATICP31939 592 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 EIF4A3P38919 411 aaKnown RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 PRKCIP41743 596 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 RBP5P82980 135 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 TCTN1Q2MV58 587 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 TOGARAM2Q6ZUX3 1019 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 IRF2BP2Q7Z5L9 587 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 RTN4RL1Q86UN2 441 aaPredicted RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 FMNL3Q8IVF7 1028 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 DBF4BQ8NFT6 615 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 SEPT8Q92599 483 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 APBB2Q92870 758 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 PPP1R10Q96QC0 940 aaKnown RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 DESI2Q9BSY9 194 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 TSPYL2Q9H2G4 693 aaPredicted RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 VRTNQ9H8Y1 702 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 NHEJ1Q9H9Q4 299 aaPredicted RBP11.45□□□□□ -0.58
CPNE3-212ENST00000621783 TMEM39AQ9NV64 488 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 POLIQ9UNA4 740 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 AGAP1Q9UPQ3 857 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 TRIP11Q15643 1979 aa11.45□□□□□ -0.58
CPNE3-212ENST00000621783 CEP350Q5VT06 3117 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 SSU72P8A0A1W2PR75 194 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 ARL5CA6NH57 179 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 NDUFA10O95299 355 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 STAU1O95793 577 aaKnown RBP11.44□□□□□ -0.58
CPNE3-212ENST00000621783 EN2P19622 333 aaPredicted RBP11.44□□□□□ -0.58
CPNE3-212ENST00000621783 CYP3A5P20815 502 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 ACO1P21399 889 aaKnown RBP11.44□□□□□ -0.58
CPNE3-212ENST00000621783 CYLC1P35663 651 aaPredicted RBP11.44□□□□□ -0.58
CPNE3-212ENST00000621783 USP8P40818 1118 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 ASPAP45381 313 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 SCNN1GP51170 649 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 SOX4Q06945 474 aaPredicted RBP11.44□□□□□ -0.58
CPNE3-212ENST00000621783 ZNF667Q5HYK9 610 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 C9orf57Q5W0N0 161 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 SCARA5Q6ZMJ2 495 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 SLC24A5Q71RS6 500 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 UBE2Q1Q7Z7E8 422 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 FAM71AQ8IYT1 594 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 LRRC52Q8N7C0 313 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 UBR7Q8N806 425 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 ACRBPQ8NEB7 543 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 GSTCDQ8NEC7 633 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 JAKMIP2Q96AA8 810 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 HPDLQ96IR7 371 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 DEF6Q9H4E7 631 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 HAUS4Q9H6D7 363 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
CPNE3-212ENST00000621783 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 USP27XA6NNY8 438 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 CCDC172P0C7W6 258 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 KRT5P13647 590 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 LRPAP1P30533 357 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 AFF1P51825 1210 aaKnown RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 KIF11P52732 1056 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 FAM189BP81408 668 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 PTK2Q05397 1052 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 NAB2Q15742 525 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 ASTE1Q2TB18 679 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 FAM43BQ6ZT52 329 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 OLIG1Q8TAK6 271 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 CCDC42Q96M95 316 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 ZNF560Q96MR9 790 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 BCO2Q9BYV7 579 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 SDCBP2Q9H190 292 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 SMYD3Q9H7B4 428 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 UBN1Q9NPG3 1134 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 PRDM5Q9NQX1 630 aaPredicted RBP11.43□□□□□ -0.58
CPNE3-212ENST00000621783 SPTLC3Q9NUV7 552 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 SLC38A7Q9NVC3 462 aa11.43□□□□□ -0.58
CPNE3-212ENST00000621783 MIOSQ9NXC5 875 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms