RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PQBP1O60828 265 aaKnown RBP11.27□□□□□ -0.61
VPS11-208ENST00000621676 RECQL4O94761 1208 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 SLC10A3P09131 477 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 FERP16591 822 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 CCL23P55773 120 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 RAB6CQ53S08 254 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 SCYL2Q6P3W7 929 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 MPZL3Q6UWV2 235 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 TFAP2BQ92481 460 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 ACAP3Q96P50 834 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 RAB6CQ9H0N0 254 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 HCSTQ9UBK5 93 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 GJD2Q9UKL4 321 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 FAM155AB1AL88 458 aaPredicted RBP11.27□□□□□ -0.61
VPS11-208ENST00000621676 DYNC1I1O14576 645 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 ATP2C2O75185 946 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 RFC5P40937 340 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 FCGRTP55899 365 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 GHRHRQ02643 423 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 TAF5Q15542 800 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 CAPN12Q6ZSI9 719 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 C1orf127Q8N9H9 656 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 SMC1BQ8NDV3 1235 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 ERO1AQ96HE7 468 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 B3GALT6Q96L58 329 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 KATNBL1Q9H079 304 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
VPS11-208ENST00000621676 TCRBV7S2A1N4TA0A589 114 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 SLC15A5A6NIM6 579 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 CA12O43570 354 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 RRP9O43818 475 aaKnown RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 ZEB2O60315 1214 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 FGGP02679 453 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 GGCXP38435 758 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 MLH1P40692 756 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 KIF22Q14807 665 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 ODF2Q5BJF6 829 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 DPY19L2P1Q6NXN4 242 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 DCUN1D2Q6PH85 259 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 ATG4AQ8WYN0 398 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 ANKRD36BP1Q96IX9 119 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 B3GNT5Q9BYG0 378 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 ZWILCHQ9H900 591 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 AIPL1Q9NZN9 384 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 AMACRQ9UHK6 382 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 NUDT5Q9UKK9 219 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 PRG3Q9Y2Y8 225 aaPredicted RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 C4BPAP04003 597 aaKnown RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 MYBL2P10244 700 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 ATF7P17544 494 aaPredicted RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 EIF4BP23588 611 aaKnown RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 NSFP46459 744 aaKnown RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 FMO1Q01740 532 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 CUL2Q13617 745 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 ZACNQ401N2 412 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 COBLL1Q53SF7 1204 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 MFSD14CQ5VZR4 134 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 IQSEC1Q6DN90 963 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 KHSRPQ92945 711 aaKnown RBP eCLIP11.26□□□□□ -0.612e-6■■■■□ 20.6
VPS11-208ENST00000621676 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 PKNOX2Q96KN3 472 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 PDZD7Q9H5P4 517 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
VPS11-208ENST00000621676 ADAM22Q9P0K1 906 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 PSME4Q14997 1843 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 DNAH14Q0VDD8 3507 aa11.26□□□□□ -0.61
VPS11-208ENST00000621676 KIF2AO00139 706 aaPredicted RBP11.25□□□□□ -0.61
VPS11-208ENST00000621676 CLDN5O00501 218 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 TADA3O75528 432 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 CHRNB2P17787 502 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 GUCY2DQ02846 1103 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 ASTE1Q2TB18 679 aaPredicted RBP11.25□□□□□ -0.61
VPS11-208ENST00000621676 ZNF667Q5HYK9 610 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 SLFN12LQ6IEE8 588 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 KCNV1Q6PIU1 500 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 USP37Q86T82 979 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 CEP57Q86XR8 500 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 TRIM58Q8NG06 486 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 GOLGA1Q92805 767 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 HPDLQ96IR7 371 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 DEFB118Q96PH6 123 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 MAGEB5Q9BZ81 275 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 ALG6Q9Y672 507 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 CDY2AQ9Y6F7 541 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 A0A1W2PQJ5 194 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 C17orf102A2RUQ5 167 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 SCAMP3O14828 347 aaKnown RBP11.25□□□□□ -0.61
VPS11-208ENST00000621676 TSPAN1O60635 241 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 PIAS1O75925 651 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 KRT10P13645 584 aa11.25□□□□□ -0.61
VPS11-208ENST00000621676 COMTP21964 271 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms