RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 A0A0B4J269 797 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 C3orf70A6NLC5 250 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 SMIM23A6NLE4 172 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CCT8L1PA6NM43 557 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CCDC169A6NNP5 214 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SPDYE16A6NNV3 312 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 SPATA31C2B4DYI2 1134 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 RASGRF2O14827 1237 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 HNRNPDLO14979 420 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 RGS16O15492 202 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 MGRN1O60291 552 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SNX3O60493 162 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CTNND1O60716 968 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 ZBED4O75132 1171 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 DGAT1O75907 488 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 KIAA0754O94854 1291 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 GJB6O95452 261 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 ECEL1O95672 775 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 TTC4O95801 387 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 ASS1P00966 412 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 GH1P01241 217 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 MYBL1P10243 752 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 ALADP13716 330 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 EDNRBP24530 442 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 MAPK4P31152 587 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 FOXN2P32314 431 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CDH5P33151 784 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 ARL2P36404 184 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 USP8P40818 1118 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SLC1A1P43005 524 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 ITGA8P53708 1063 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 OAZ1P54368 228 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 BACE1P56817 501 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 GSCP56915 257 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 WDR4P57081 412 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 ACTR2P61160 394 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 TGFB2P61812 414 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 NOP14P78316 857 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 ELF3P78545 371 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 SP2Q02086 613 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 C1QBPQ07021 282 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 IFFO1Q0D2I5 559 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CETN1Q12798 172 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 FSTL1Q12841 308 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 DMP1Q13316 513 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 MAMLD1Q13495 774 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CUL2Q13617 745 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CAPSQ13938 189 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 BAATQ14032 418 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 TMEM132BQ14DG7 1078 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 TNIP1Q15025 636 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 LONRF1Q17RB8 773 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 GALNTL6Q49A17 601 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 PREPLQ4J6C6 727 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 CCDC38Q502W7 563 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 C2CD6Q53TS8 623 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 NOL9Q5SY16 702 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 C6orf118Q5T5N4 469 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 WLSQ5T9L3 541 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 NBPF12Q5TAG4 269 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 CDCA2Q69YH5 1023 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 CIAPIN1Q6FI81 312 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SMYD5Q6GMV2 418 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 HIBCHQ6NVY1 386 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 CYB5D1Q6P9G0 228 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 DRICH1Q6PGQ1 229 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 SAMD1Q6SPF0 538 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 CCDC121Q6ZUS5 278 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CROCCP2Q86T23 111 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 PRUNE1Q86TP1 453 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 TDRPQ86YL5 185 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 BRSK2Q8IWQ3 736 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 NIM1KQ8IY84 436 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CCDC105Q8IYK2 499 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SCYL3Q8IZE3 742 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 FUKQ8N0W3 1084 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 ABRAQ8N0Z2 381 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CPXCR1Q8N123 301 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 OTUD6BQ8N6M0 293 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 RBBP8NLQ8NC74 664 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 CCDC197Q8NCU1 140 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 OR5B17Q8NGF7 314 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 EXD1Q8NHP7 514 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 UHMK1Q8TAS1 419 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 DENND1AQ8TEH3 1009 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 IPO4Q8TEX9 1081 aaKnown RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 MAIP1Q8WWC4 291 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CKAP2Q8WWK9 683 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 CPA5Q8WXQ8 436 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 MAML1Q92585 1016 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 ZKSCAN4Q969J2 545 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 CCDC127Q96BQ5 260 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 TRIM11Q96F44 468 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SGSM3Q96HU1 749 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 VCPIP1Q96JH7 1222 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 ZBTB45Q96K62 511 aaPredicted RBP3.44□□□□□ -1.86
U1.39-201ENST00000621562 FGD4Q96M96 766 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 PWWP2AQ96N64 755 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SERPINB12Q96P63 405 aa3.44□□□□□ -1.86
U1.39-201ENST00000621562 SLITRK1Q96PX8 696 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms