RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 NR1H3Q13133 447 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 TUSC3Q13454 348 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 MRPL58Q14197 206 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SEC23AQ15436 765 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 PTPRNQ16849 979 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 MAP7D1Q3KQU3 841 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 XKR3Q5GH77 459 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 C6orf118Q5T5N4 469 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 IFIT1BQ5T764 474 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 VPS53Q5VIR6 699 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 BROXQ5VW32 411 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CEP57Q86XR8 500 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 HOMER1Q86YM7 354 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SPACA3Q8IXA5 215 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 FAM9BQ8IZU0 186 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 LSMEM2Q8N112 164 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CMTR1Q8N1G2 835 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 LRRC71Q8N4P6 559 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 KIAA1958Q8N8K9 716 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF248Q8NDW4 579 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ENGASEQ8NFI3 743 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 RPLP0P6Q8NHW5 317 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 KCNV2Q8TDN2 545 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 RHBDD1Q8TEB9 315 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SETD7Q8WTS6 366 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SPIRE2Q8WWL2 714 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 DNASE2BQ8WZ79 361 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 FOXJ1Q92949 421 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 RSPRY1Q96DX4 576 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 RRP36Q96EU6 259 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SPACA7Q96KW9 195 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 B3GALT6Q96L58 329 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SCLT1Q96NL6 688 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 HHIPQ96QV1 700 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CEP89Q96ST8 783 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 PPP1R16BQ96T49 567 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ZKSCAN3Q9BRR0 538 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SPZ1Q9BXG8 430 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 LRRC3Q9BY71 257 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 OXCT2Q9BYC2 517 aaPredicted RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 DPH1Q9BZG8 443 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 FAM117AQ9C073 453 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SEMA4CQ9C0C4 833 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CSRNP2Q9H175 543 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 GLT8D2Q9H1C3 349 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 RNF39Q9H2S5 420 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 FZD8Q9H461 694 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CNNM2Q9H8M5 875 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 GPRC5CQ9NQ84 441 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 ZBTB40Q9NUA8 1239 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 SNTG2Q9NY99 539 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 HSPBP1Q9NZL4 362 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 PKD2L1Q9P0L9 805 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CEP72Q9P209 647 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 HSFX1Q9UBD0 423 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 GABBR1Q9UBS5 961 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 AFF4Q9UHB7 1163 aaKnown RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 TNNQ9UQP3 1299 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 INVSQ9Y283 1065 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 MAN2B2Q9Y2E5 1009 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 PPME1Q9Y570 386 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 IPPQ9Y573 584 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 HEMK1Q9Y5R4 338 aaPredicted RBP2.65□□□□□ -1.99
CPNE3-211ENST00000621526 CDY1Q9Y6F8 540 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 AK5Q9Y6K8 562 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 MGAQ8IWI9 3026 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 AHCTF1Q8WYP5 2266 aa2.65□□□□□ -1.99
CPNE3-211ENST00000621526 USP9YO00507 2555 aaPredicted RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 POLQO75417 2590 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 FLNCQ14315 2725 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ATG2AQ2TAZ0 1938 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 LRRK2Q5S007 2527 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 DDX11L8A8MPP1 907 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 F8W810 466 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PLK4O00444 970 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SYN3O14994 580 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 FLRT2O43155 660 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PCDHGA12O60330 932 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 DFNA5O60443 496 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF217O75362 1048 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 STBD1O95210 358 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SEC24AO95486 1093 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 OATP04181 439 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 THP07101 528 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 MYL4P12829 197 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SFNP31947 248 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 GJA4P35212 333 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 HNF1BP35680 557 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 MLH1P40692 756 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 MCM2P49736 904 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SCNN1GP51170 649 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 MFAP1P55081 439 aaKnown RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SEMG2Q02383 582 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 TNK2Q07912 1038 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PLD1Q13393 1074 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ILKQ13418 452 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 DRP2Q13474 957 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 LY6DQ14210 128 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PDGFRLQ15198 375 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 TEAD2Q15562 447 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms