RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 JMJD4Q9H9V9 463 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 MSRAQ9UJ68 235 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC16A3O15427 465 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 PSMD3O43242 534 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC26A4O43511 780 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SYNCRIPO60506 623 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 PALMO75781 387 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 AMHP03971 560 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 EPHB3P54753 998 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SESN3P58005 492 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 RPL10AP62906 217 aaKnown RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 CAV1Q03135 178 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 BTG3Q14201 252 aaPredicted RBP10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SERPINI1Q99574 410 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 SPATA16Q9BXB7 569 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 KLK14Q9P0G3 267 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 MRFAP1Q9Y605 127 aa10.31□□□□□ -0.76
CLTCL1-211ENST00000621271 ANKRD65E5RJM6 399 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 EEF2KO00418 725 aaKnown RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 CYP26A1O43174 497 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 TADA3O75528 432 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 INHBEP58166 350 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 RRM2BQ7LG56 351 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ZC3H18Q86VM9 953 aaKnown RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 RNF135Q8IUD6 432 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 L3MBTL3Q96JM7 780 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 CCDC138Q96M89 665 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 MTG1Q9BT17 334 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 TRIM15Q9C019 465 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 XPNPEP3Q9NQH7 507 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 OLFML3Q9NRN5 406 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 L3MBTL1Q9Y468 752 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 CHUKO15111 745 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 STRNO43815 780 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 SLC2A3P11169 496 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 AKR1A1P14550 325 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 EIF3BP55884 814 aaKnown RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 RBBP7Q16576 425 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 CTXN3Q4LDR2 81 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ACAD11Q709F0 780 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 TBC1D1Q86TI0 1168 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 PPM1NQ8N819 430 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 SCFD1Q8WVM8 642 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 TTC17Q96AE7 1141 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 OTUB1Q96FW1 271 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 NPHP3-ACAD11A0A0J9YXS1 232 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 OPHN1O60890 802 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ACADMP11310 421 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 KCNA2P16389 499 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 GUCY2CP25092 1073 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 INTS5Q6P9B9 1019 aaKnown RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 BHMTQ93088 406 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 HPDLQ96IR7 371 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 HTATIP2Q9BUP3 242 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 TRPM5Q9NZQ8 1165 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 TMEM131LA2VDJ0 1609 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 SPECC1L-ADORA2AF8WAN1 911 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 DNAJB2P25686 324 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ZNF177Q13360 481 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ATP6V0D2Q8N8Y2 350 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ACER1Q8TDN7 264 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 KLHL29Q96CT2 875 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 REEP2Q9BRK0 252 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 ALDH8A1Q9H2A2 487 aaPredicted RBP10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 NEUROG2Q9H2A3 272 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 SELENONQ9NZV5 590 aa10.3□□□□□ -0.76
CLTCL1-211ENST00000621271 NDUFS3O75489 264 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 PPP4CP60510 307 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 GPS1Q13098 491 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 EFHC1Q5JVL4 640 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 RBBP8NLQ8NC74 664 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 USP33Q8TEY7 942 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 UNC45AQ9H3U1 944 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 SFMBT1Q9UHJ3 866 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 ANO9A1A5B4 782 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 ALDH2P05091 517 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 HERVK_113P62684 666 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 POLD3Q15054 466 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 FASTKD1Q53R41 847 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 HIBCHQ6NVY1 386 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 PPP1R2P1Q96PQ5 205 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 TUBB6Q9BUF5 446 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 GPR63Q9BZJ6 419 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 THG1LQ9NWX6 298 aaKnown RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 TEKT2Q9UIF3 430 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 SNX24Q9Y343 169 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 NRXN1Q9ULB1 1477 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 NCAM1P13591 858 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 ADCY2Q08462 1091 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 STARD3Q14849 445 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 C6orf118Q5T5N4 469 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 ZNF280DQ6N043 979 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 WNT8AQ9H1J5 351 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 VPS33BQ9H267 617 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 VCAM1P19320 739 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 GGCXP38435 758 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 CCZ1BP86790 482 aa10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 CCZ1P86791 482 aaPredicted RBP10.29□□□□□ -0.76
CLTCL1-211ENST00000621271 GFPT1Q06210 699 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms